Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PTCHD1Q96NR3 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AL158152.1-201ENST00000602652 1435 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 Y_RNA.6-201ENST00000362350 114 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RNU6-1320P-201ENST00000390838 107 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RNU6-1269P-201ENST00000391139 107 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 UBBP1-201ENST00000392399 473 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AL663061.1-201ENST00000416625 580 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 MTND1P23-201ENST00000416931 372 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AP003385.1-201ENST00000426387 893 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 Z68868.1-201ENST00000429048 544 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RPS10P21-201ENST00000430654 475 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 YWHAZP2-201ENST00000440317 728 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AL357520.1-201ENST00000441557 453 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 GAPDHP20-201ENST00000444107 1007 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC022080.2-201ENST00000452932 533 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RPL21P134-201ENST00000453468 483 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RNU6-599P-201ENST00000459383 107 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RNU6-1193P-201ENST00000459461 107 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RPSAP24-201ENST00000461543 873 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RPS7P7-201ENST00000463499 571 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RN7SL70P-201ENST00000478322 302 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC112198.1-201ENST00000505369 1220 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC011352.2-201ENST00000514574 1016 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 MTND4LP26-201ENST00000518144 282 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 OR5D2P-201ENST00000524390 911 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 OR5AK3P-201ENST00000527486 1297 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 SNRPCP6-201ENST00000528310 210 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC022146.1-201ENST00000595307 847 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC068790.7-201ENST00000602347 528 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AL021368.3-201ENST00000607119 578 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 U6.42-201ENST00000618440 107 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 MIR6849-201ENST00000618543 69 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RNU6-368P-201ENST00000620928 107 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 RNU6-538P-201ENST00000622329 107 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC006328.2-201ENST00000623198 397 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC011815.3-201ENST00000624194 473 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AC012005.2-201ENST00000624333 397 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 SNORA16A-202ENST00000628458 135 ntBASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PTCHD1Q96NR3 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AL355852.1-201ENST00000454081 1771 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms