Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NEPNP-201ENST00000404786 1371 ntBASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM5Q96HC4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 VN1R12P-201ENST00000403778 876 ntBASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AC093084.1-201ENST00000424233 687 ntBASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 YY1P1-201ENST00000427625 668 ntBASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 NDUFB4P8-201ENST00000435351 367 ntBASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 MTND2P40-201ENST00000436718 841 ntBASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 RPL5P25-201ENST00000441148 775 ntBASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AC007386.1-201ENST00000455212 582 ntBASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 RPS23P6-201ENST00000466136 431 ntBASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AC109635.6-201ENST00000525487 1113 ntBASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 IGBP1P1-201ENST00000554337 1009 ntBASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AC067773.1-201ENST00000603284 1094 ntBASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AC016745.2-201ENST00000608834 3443 ntBASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM5Q96HC4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 BCORP1-203ENST00000513194 5093 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 SNORD65-201ENST00000391079 73 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 U3.23-201ENST00000391132 200 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 RPL10P10-201ENST00000403509 664 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 RPS20P25-201ENST00000412447 352 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC113412.1-201ENST00000425840 504 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC006335.2-201ENST00000437993 330 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 MED28P3-201ENST00000444288 531 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AL157385.1-201ENST00000446973 268 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 LRRC37A14P-201ENST00000452297 462 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AL445665.1-202ENST00000452436 324 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 HSPE1P22-201ENST00000456856 327 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC104629.2-201ENST00000468627 598 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC093827.1-201ENST00000480094 861 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC021106.1-201ENST00000509020 1058 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC019322.1-201ENST00000571869 389 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AP001496.3-201ENST00000580230 913 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AL138895.2-201ENST00000603019 178 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AL499605.1-201ENST00000604628 403 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC021766.1-201ENST00000624404 741 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 AC087565.3-203ENST00000641018 837 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 MT-RNR2-201ENST00000387347 1559 ntBASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM5Q96HC4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms