Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 FAM106CP-201ENST00000582212 507 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 HMGB1P51-201ENST00000605166 638 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 NANOGP3-201ENST00000605855 286 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC007620.3-201ENST00000608131 497 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC015819.1-201ENST00000613588 663 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 uc_338.29-201ENST00000615099 168 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 AL445670.1-201ENST00000618889 801 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 PSG10P-201ENST00000501199 1500 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFT1Q96AA3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFT1Q96AA3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 MUC2-202ENST00000613187 4845 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RFT1Q96AA3 AC104964.3-201ENST00000606115 2860 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RFT1Q96AA3 MFSD8-219ENST00000641228 2559 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RFT1Q96AA3 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.05□□□□□ -1.6
RFT1Q96AA3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFT1Q96AA3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFT1Q96AA3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFT1Q96AA3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 FBXL21-201ENST00000297158 1305 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RFT1Q96AA3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFT1Q96AA3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC104260.2-201ENST00000623551 3497 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC010132.2-201ENST00000295493 1043 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC092681.1-201ENST00000297369 291 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 YWHAZP6-201ENST00000399764 738 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 AMZ2P2-201ENST00000406819 1057 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 MTND3P20-201ENST00000407663 186 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 EEF1B2P8-201ENST00000414101 671 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 FAM204CP-201ENST00000424489 642 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 AL445928.1-201ENST00000435545 222 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC004129.2-201ENST00000457229 287 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 COX6B1P2-201ENST00000489624 230 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC023424.1-201ENST00000496058 459 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC106822.1-201ENST00000502647 526 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 RNU6-491P-201ENST00000516099 110 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RFT1Q96AA3 COX6CP7-201ENST00000597056 208 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 KATNBL1P1-201ENST00000605192 748 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC010632.3-201ENST00000611377 369 ntBASIC5.04□□□□□ -1.6
RFT1Q96AA3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RFT1Q96AA3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RFT1Q96AA3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.04□□□□□ -1.6
RFT1Q96AA3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.03□□□□□ -1.6
RFT1Q96AA3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RFT1Q96AA3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms