Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC012254.3-201ENST00000591183 2117 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.54□□□□□ -1.36
HPS3Q969F9 AF230666.2-201ENST00000602328 725 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 AC096947.1-201ENST00000603233 470 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 AC079880.2-201ENST00000603790 1213 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 AC034236.3-201ENST00000605999 461 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HPS3Q969F9 MIR1910-201ENST00000636955 80 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 AC099654.9-201ENST00000637055 678 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
HPS3Q969F9 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.54□□□□□ -1.36
HPS3Q969F9 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.54□□□□□ -1.36
HPS3Q969F9 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HPS3Q969F9 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HPS3Q969F9 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HPS3Q969F9 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HPS3Q969F9 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HPS3Q969F9 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.54□□□□□ -1.36
HPS3Q969F9 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
HPS3Q969F9 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HPS3Q969F9 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HPS3Q969F9 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HPS3Q969F9 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HPS3Q969F9 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HPS3Q969F9 AC092070.2-203ENST00000598377 3644 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.53□□□□□ -1.36
HPS3Q969F9 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
HPS3Q969F9 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HPS3Q969F9 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HPS3Q969F9 SNORD1C-201ENST00000363315 78 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HPS3Q969F9 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
HPS3Q969F9 RNA5SP105-201ENST00000391123 113 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HPS3Q969F9 AL024507.1-201ENST00000412741 274 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AL158050.1-201ENST00000416077 457 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.53□□□□□ -1.36
HPS3Q969F9 DPPA2P2-201ENST00000418220 897 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 RPS26P13-201ENST00000419030 330 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.53□□□□□ -1.36
HPS3Q969F9 MTCYBP21-201ENST00000443300 1113 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AL353898.1-201ENST00000444055 238 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AC005077.1-201ENST00000449226 375 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AC144530.1-201ENST00000452862 555 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HPS3Q969F9 Z83838.1-202ENST00000456225 839 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AC004129.2-201ENST00000457229 287 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AC092691.2-201ENST00000461787 803 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AP002884.1-201ENST00000479691 655 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 RN7SL193P-201ENST00000491708 276 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 PPM1AP1-201ENST00000502740 1135 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.53□□□□□ -1.36
HPS3Q969F9 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.53□□□□□ -1.36
HPS3Q969F9 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.53□□□□□ -1.36
HPS3Q969F9 AC134669.1-201ENST00000581275 672 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AC027449.1-201ENST00000608890 407 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AP005229.2-201ENST00000609980 697 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AC241377.1-201ENST00000619797 406 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AC021422.1-201ENST00000621212 473 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AC092159.4-201ENST00000624944 550 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 AP003485.1-201ENST00000625093 753 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 OR4G3P-201ENST00000633500 913 ntBASIC6.53□□□□□ -1.36
HPS3Q969F9 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HPS3Q969F9 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HPS3Q969F9 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HPS3Q969F9 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
HPS3Q969F9 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.53□□□□□ -1.36
HPS3Q969F9 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HPS3Q969F9 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
HPS3Q969F9 HSPD1P7-201ENST00000447985 1686 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.52□□□□□ -1.37
HPS3Q969F9 PARP4P2-201ENST00000446672 3326 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HPS3Q969F9 AL161912.4-201ENST00000623889 2468 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HPS3Q969F9 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HPS3Q969F9 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.52□□□□□ -1.37
HPS3Q969F9 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.52□□□□□ -1.37
HPS3Q969F9 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HPS3Q969F9 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HPS3Q969F9 RNA5SP273-201ENST00000362484 113 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.52□□□□□ -1.37
HPS3Q969F9 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HPS3Q969F9 MTATP6P31-201ENST00000406985 692 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.52□□□□□ -1.37
HPS3Q969F9 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC6.52□□□□□ -1.37
HPS3Q969F9 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.52□□□□□ -1.37
HPS3Q969F9 KCTD9P1-201ENST00000430462 1167 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.52□□□□□ -1.37
HPS3Q969F9 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HPS3Q969F9 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.52□□□□□ -1.37
HPS3Q969F9 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.52□□□□□ -1.37
HPS3Q969F9 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HPS3Q969F9 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.52□□□□□ -1.37
HPS3Q969F9 PPIAP27-201ENST00000453800 265 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 AC093166.4-201ENST00000457867 318 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 LARP7P4-201ENST00000481075 878 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 AC108729.1-201ENST00000487812 947 ntBASIC6.52□□□□□ -1.37
HPS3Q969F9 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.52□□□□□ -1.37
HPS3Q969F9 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms