Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC010266.2-201ENST00000564741 3255 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 MIR551A-201ENST00000385042 96 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 TRGV7-201ENST00000427089 353 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC093720.1-201ENST00000505681 714 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AL020997.2-201ENST00000602607 184 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 EIF2S2P2-201ENST00000447161 982 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 ABCC13-202ENST00000463099 3842 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 RPS7P6-201ENST00000485777 579 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 SLC25A15P5-201ENST00000508033 253 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 DHFRP1-201ENST00000579682 559 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 MIR4737-201ENST00000583979 81 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 CDC42EP3P1-201ENST00000601004 764 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AL683813.2-201ENST00000605245 502 ntBASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC3.6□□□□□ -1.83
ALMS1Q8TCU4 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AC096921.1-201ENST00000411661 375 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 NANOGP9-201ENST00000439890 892 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 GTF2IP11-201ENST00000526931 420 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AP006289.1-201ENST00000538089 277 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AC010435.1-201ENST00000623353 1177 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AC099494.2-201ENST00000623371 978 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 BX284613.1-201ENST00000452221 1641 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AC083899.1-201ENST00000454465 3819 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 RPL12P28-201ENST00000430852 489 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 RPL12P17-201ENST00000432393 498 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AC091912.1-201ENST00000511351 248 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AP002981.1-201ENST00000517692 975 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 MIR6716-201ENST00000613413 80 ntBASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ALMS1Q8TCU4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 AC021876.1-201ENST00000425959 359 ntBASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 GTF2F2P1-201ENST00000511083 675 ntBASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 RNA5SP392-201ENST00000516905 112 ntBASIC3.59□□□□□ -1.84
ALMS1Q8TCU4 AC005962.2-201ENST00000611427 652 ntBASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms