Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AL606537.1-201ENST00000607258 2011 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 AC112198.2-201ENST00000426589 6996 ntBASIC5.29□□□□□ -1.56
CLHC1Q8NHS4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 CR382285.2-201ENST00000624662 1495 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 RNA5SP433-201ENST00000364491 114 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 GAPDHP15-201ENST00000398586 975 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 PPIAP9-201ENST00000403866 498 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 GPS2P1-201ENST00000411761 986 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AL591623.2-201ENST00000449978 222 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AP000547.1-201ENST00000454360 617 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC019084.1-201ENST00000457337 432 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC087672.1-201ENST00000479876 766 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 RN7SKP5-201ENST00000517045 272 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 TRIM77BP-201ENST00000524985 1119 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 OR10D4P-201ENST00000525892 951 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC010547.7-201ENST00000570323 333 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC027216.1-201ENST00000577726 685 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AP005403.1-201ENST00000579720 229 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AP000769.2-201ENST00000602344 396 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AL356608.1-201ENST00000610034 820 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AC025574.2-201ENST00000615621 514 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AL162574.1-201ENST00000615702 950 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 MIR6071-201ENST00000616741 78 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLHC1Q8NHS4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AL929601.4-201ENST00000613011 1341 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 OR7E101P-201ENST00000400428 513 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 RPL5P25-201ENST00000441148 775 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AP006222.1-205ENST00000450734 457 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 RPS3AP15-201ENST00000483874 781 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AC021106.1-201ENST00000509020 1058 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 RPS27AP18-201ENST00000515536 459 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 SEPT10P1-201ENST00000517342 1162 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 KCTD9P6-201ENST00000522306 950 ntBASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.27□□□□□ -1.57
CLHC1Q8NHS4 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms