Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 HNRNPRP2-201ENST00000528421 743 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC092332.1-201ENST00000563684 829 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 RN7SL66P-201ENST00000582099 264 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC068768.2-201ENST00000602352 343 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AL135999.3-201ENST00000610501 812 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 PDZK1P1-202ENST00000425209 1350 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 AC068870.1-201ENST00000563737 2455 ntBASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC71LQ8N9Z2 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 HSPD1P9-201ENST00000420325 1636 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC004817.4-201ENST00000602396 3625 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 PWAR1-201ENST00000624188 2414 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC112255.1-201ENST00000624070 2493 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 OR7E25P-201ENST00000344844 931 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 OR1L6-202ENST00000373684 1044 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 RNA5SP198-201ENST00000410376 127 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 RPS6P23-201ENST00000413224 722 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 MTND4LP21-201ENST00000415303 295 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC013470.3-201ENST00000420252 1194 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 RPL19P16-201ENST00000433839 588 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AL596266.1-201ENST00000448132 400 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 PPIAP32-201ENST00000449940 472 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AZGP1P2-201ENST00000454506 345 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC093166.4-201ENST00000457867 318 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AP000942.1-201ENST00000463969 747 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 RPS27P20-201ENST00000492051 246 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC113367.2-201ENST00000505749 160 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC021106.1-201ENST00000509020 1058 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC006349.1-201ENST00000555526 235 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 MIR4776-2-201ENST00000580204 80 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AP005119.1-201ENST00000580956 292 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC090236.2-201ENST00000587933 1101 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC245014.3-201ENST00000618589 347 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AL138693.1-201ENST00000622219 129 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AL357140.4-201ENST00000636827 412 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC027088.4-201ENST00000611559 1947 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC022417.1-201ENST00000624768 1303 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC021242.1-201ENST00000507315 2035 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC011755.1-201ENST00000623763 2049 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 MTCO1P22-201ENST00000604619 1360 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 CASC19-221ENST00000641309 1382 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 AC018809.2-201ENST00000602436 3823 ntBASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC71LQ8N9Z2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms