Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 AC114947.2-201ENST00000565748 2125 ntBASIC8.26□□□□□ -1.09
VPS8Q8N3P4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VPS8Q8N3P4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 RNA5SP453-201ENST00000362503 119 ntBASIC8.25□□□□□ -1.09
VPS8Q8N3P4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 MIR765-201ENST00000390226 114 ntBASIC8.25□□□□□ -1.09
VPS8Q8N3P4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 AC009127.1-201ENST00000467090 155 ntBASIC8.25□□□□□ -1.09
VPS8Q8N3P4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 AC078880.4-201ENST00000617627 1749 ntBASIC8.25□□□□□ -1.09
VPS8Q8N3P4 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VPS8Q8N3P4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AL109941.1-201ENST00000401925 229 ntBASIC8.24□□□□□ -1.09
VPS8Q8N3P4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC8.24□□□□□ -1.09
VPS8Q8N3P4 PSMD10P3-201ENST00000437000 448 ntBASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AC016772.1-201ENST00000444170 1261 ntBASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AC108161.1-201ENST00000461060 402 ntBASIC8.24□□□□□ -1.09
VPS8Q8N3P4 RPSAP50-201ENST00000481955 852 ntBASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AC044860.2-201ENST00000561005 179 ntBASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AC011447.4-201ENST00000587562 111 ntBASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AL162431.4-201ENST00000604674 411 ntBASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AC023421.1-201ENST00000590535 1785 ntBASIC8.24□□□□□ -1.09
VPS8Q8N3P4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AP000547.3-204ENST00000588548 2523 ntBASIC8.24□□□□□ -1.09
VPS8Q8N3P4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VPS8Q8N3P4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 RNA5SP90-201ENST00000364801 99 ntBASIC8.23□□□□□ -1.09
VPS8Q8N3P4 AL645927.1-201ENST00000396783 406 ntBASIC8.23□□□□□ -1.09
VPS8Q8N3P4 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 AC090018.1-201ENST00000434369 367 ntBASIC8.23□□□□□ -1.09
VPS8Q8N3P4 DNAJB5P1-201ENST00000454004 806 ntBASIC8.23□□□□□ -1.09
VPS8Q8N3P4 RPL7AP6-201ENST00000477943 801 ntBASIC8.23□□□□□ -1.09
VPS8Q8N3P4 EIF3KP3-201ENST00000514461 639 ntBASIC8.23□□□□□ -1.09
VPS8Q8N3P4 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 AC009597.2-201ENST00000604659 592 ntBASIC8.23□□□□□ -1.09
VPS8Q8N3P4 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 ZNF733P-202ENST00000444809 1573 ntBASIC8.23□□□□□ -1.09
VPS8Q8N3P4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC8.23□□□□□ -1.09
VPS8Q8N3P4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 RNU1-19P-201ENST00000363306 165 ntBASIC8.22□□□□□ -1.09
VPS8Q8N3P4 SNORA70-201ENST00000384436 135 ntBASIC8.22□□□□□ -1.09
VPS8Q8N3P4 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 RN7SKP213-201ENST00000410746 298 ntBASIC8.22□□□□□ -1.09
VPS8Q8N3P4 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
VPS8Q8N3P4 AC013701.1-201ENST00000522657 465 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms