Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 TRGV5P-201ENST00000419915 354 ntBASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 TNPO1P1-201ENST00000423641 1138 ntBASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AC002069.1-201ENST00000429649 1159 ntBASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 MTND2P40-201ENST00000436718 841 ntBASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 MED28P3-201ENST00000444288 531 ntBASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 DEFB109A-201ENST00000482450 265 ntBASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AC019322.1-201ENST00000571869 389 ntBASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AP005403.1-201ENST00000579720 229 ntBASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AC008521.2-201ENST00000591021 259 ntBASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AC015982.1-201ENST00000608113 465 ntBASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 AL138820.1-201ENST00000617901 5305 ntBASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCDC65Q8IXS2 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 OOSP1-201ENST00000398992 1270 ntBASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 VN1R3-201ENST00000418822 919 ntBASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 RPS29P14-201ENST00000431518 171 ntBASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AC019185.1-201ENST00000442718 389 ntBASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 HMGN1P36-201ENST00000446623 298 ntBASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AC090888.3-201ENST00000558917 509 ntBASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 MIR7853-201ENST00000584820 132 ntBASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AL118522.2-201ENST00000616045 615 ntBASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AC127024.6-201ENST00000621598 424 ntBASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AC073869.8-201ENST00000641806 335 ntBASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.09□□□□□ -1.43
CCDC65Q8IXS2 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.09□□□□□ -1.44
CCDC65Q8IXS2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.09□□□□□ -1.44
CCDC65Q8IXS2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC65Q8IXS2 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC65Q8IXS2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 TMSB4XP4-201ENST00000323496 618 ntBASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 PPIAP9-201ENST00000403866 498 ntBASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 SNORA11.5-201ENST00000408163 128 ntBASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 AC009784.1-201ENST00000426484 460 ntBASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 AC090568.1-201ENST00000509499 856 ntBASIC6.08□□□□□ -1.44
CCDC65Q8IXS2 AC074087.1-201ENST00000512059 724 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms