Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
GABPAQ06546 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GABPAQ06546 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GABPAQ06546 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
GABPAQ06546 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
GABPAQ06546 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GABPAQ06546 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.35□□□□□ -1.39
GABPAQ06546 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
GABPAQ06546 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
GABPAQ06546 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GABPAQ06546 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.35□□□□□ -1.39
GABPAQ06546 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.35□□□□□ -1.39
GABPAQ06546 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.35□□□□□ -1.39
GABPAQ06546 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.35□□□□□ -1.39
GABPAQ06546 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
GABPAQ06546 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.35□□□□□ -1.39
GABPAQ06546 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.35□□□□□ -1.39
GABPAQ06546 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.35□□□□□ -1.39
GABPAQ06546 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.35□□□□□ -1.39
GABPAQ06546 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.35□□□□□ -1.39
GABPAQ06546 RN7SL356P-201ENST00000582228 248 ntBASIC6.35□□□□□ -1.39
GABPAQ06546 TAS2R6P-201ENST00000605022 826 ntBASIC6.35□□□□□ -1.39
GABPAQ06546 AL137246.1-201ENST00000607072 977 ntBASIC6.35□□□□□ -1.39
GABPAQ06546 RPSAP73-201ENST00000614820 330 ntBASIC6.35□□□□□ -1.39
GABPAQ06546 AC074101.1-201ENST00000637861 241 ntBASIC6.35□□□□□ -1.39
GABPAQ06546 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.35□□□□□ -1.39
GABPAQ06546 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
GABPAQ06546 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
GABPAQ06546 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
GABPAQ06546 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
GABPAQ06546 AC104964.3-201ENST00000606115 2860 ntBASIC6.35□□□□□ -1.39
GABPAQ06546 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GABPAQ06546 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
GABPAQ06546 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GABPAQ06546 CR383656.5-201ENST00000547616 1340 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.34□□□□□ -1.39
GABPAQ06546 RPL23AP18-201ENST00000416139 468 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 PSMD10P3-201ENST00000437000 448 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.34□□□□□ -1.39
GABPAQ06546 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.34□□□□□ -1.39
GABPAQ06546 RN7SL826P-201ENST00000479724 288 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 AC058823.1-201ENST00000485315 474 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 AC231760.1-201ENST00000498002 260 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.34□□□□□ -1.39
GABPAQ06546 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.34□□□□□ -1.39
GABPAQ06546 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.34□□□□□ -1.39
GABPAQ06546 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.34□□□□□ -1.39
GABPAQ06546 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.34□□□□□ -1.39
GABPAQ06546 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.34□□□□□ -1.39
GABPAQ06546 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.34□□□□□ -1.39
GABPAQ06546 MIR3691-201ENST00000578066 90 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.34□□□□□ -1.39
GABPAQ06546 BNIP3P32-201ENST00000600015 554 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 AC095055.1-201ENST00000603472 1113 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 AL121612.2-201ENST00000612261 482 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 AC068870.2-201ENST00000620635 389 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.34□□□□□ -1.39
GABPAQ06546 LINC01739-205ENST00000641890 573 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GABPAQ06546 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
GABPAQ06546 ZNF733P-202ENST00000444809 1573 ntBASIC6.34□□□□□ -1.39
GABPAQ06546 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
GABPAQ06546 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.34□□□□□ -1.39
GABPAQ06546 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.34□□□□□ -1.4
GABPAQ06546 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
GABPAQ06546 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
GABPAQ06546 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.34□□□□□ -1.4
GABPAQ06546 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
GABPAQ06546 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.34□□□□□ -1.4
GABPAQ06546 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.34□□□□□ -1.4
GABPAQ06546 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GABPAQ06546 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.33□□□□□ -1.4
GABPAQ06546 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GABPAQ06546 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
GABPAQ06546 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.33□□□□□ -1.4
GABPAQ06546 U3.36-201ENST00000408418 213 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 OTX2P1-201ENST00000450956 354 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 AC104634.1-201ENST00000452720 462 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.33□□□□□ -1.4
GABPAQ06546 AC092754.1-201ENST00000472975 479 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 RPL5P12-201ENST00000477071 851 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 RPSAP50-201ENST00000481955 852 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 RPS4XP20-201ENST00000505751 772 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.33□□□□□ -1.4
GABPAQ06546 OR8G3P-201ENST00000533406 921 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.33□□□□□ -1.4
GABPAQ06546 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
GABPAQ06546 AC007066.2-202ENST00000566531 914 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 AL359715.3-201ENST00000569267 2123 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 ADAM3B-201ENST00000569937 840 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 AC006116.3-201ENST00000592968 361 ntBASIC6.33□□□□□ -1.4
GABPAQ06546 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.33□□□□□ -1.4
GABPAQ06546 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
GABPAQ06546 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
GABPAQ06546 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
GABPAQ06546 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
GABPAQ06546 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.33□□□□□ -1.4
GABPAQ06546 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms