Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VSX2P58304 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VSX2P58304 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
VSX2P58304 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 AC005005.4-201ENST00000623789 16698 ntBASIC5.29□□□□□ -1.56
VSX2P58304 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
VSX2P58304 AC114774.1-201ENST00000507410 1770 ntBASIC5.29□□□□□ -1.56
VSX2P58304 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.29□□□□□ -1.56
VSX2P58304 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VSX2P58304 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
VSX2P58304 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.29□□□□□ -1.56
VSX2P58304 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.29□□□□□ -1.56
VSX2P58304 MAPK10-338ENST00000641647 3362 ntBASIC5.29□□□□□ -1.56
VSX2P58304 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.28□□□□□ -1.56
VSX2P58304 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
VSX2P58304 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
VSX2P58304 CIR1P2-201ENST00000514821 1342 ntBASIC5.28□□□□□ -1.56
VSX2P58304 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
VSX2P58304 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VSX2P58304 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
VSX2P58304 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.28□□□□□ -1.56
VSX2P58304 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 RNA5SP234-201ENST00000363916 119 ntBASIC5.28□□□□□ -1.56
VSX2P58304 SNORA5.1-201ENST00000384275 131 ntBASIC5.28□□□□□ -1.56
VSX2P58304 PEX12P1-201ENST00000400284 1048 ntBASIC5.28□□□□□ -1.56
VSX2P58304 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.28□□□□□ -1.56
VSX2P58304 RN7SKP59-201ENST00000410520 314 ntBASIC5.28□□□□□ -1.56
VSX2P58304 GABARAPL3-201ENST00000412799 354 ntBASIC5.28□□□□□ -1.56
VSX2P58304 RPSAP35-201ENST00000413753 818 ntBASIC5.28□□□□□ -1.56
VSX2P58304 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.28□□□□□ -1.56
VSX2P58304 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.28□□□□□ -1.56
VSX2P58304 AC007386.1-201ENST00000455212 582 ntBASIC5.28□□□□□ -1.56
VSX2P58304 AC108693.1-201ENST00000496068 432 ntBASIC5.28□□□□□ -1.56
VSX2P58304 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.28□□□□□ -1.56
VSX2P58304 ATP5LP3-201ENST00000514223 304 ntBASIC5.28□□□□□ -1.56
VSX2P58304 SNORA70.11-201ENST00000515987 138 ntBASIC5.28□□□□□ -1.56
VSX2P58304 SNORA70.13-201ENST00000516116 138 ntBASIC5.28□□□□□ -1.56
VSX2P58304 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.28□□□□□ -1.56
VSX2P58304 OR5AM1P-201ENST00000532136 1032 ntBASIC5.28□□□□□ -1.56
VSX2P58304 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.28□□□□□ -1.56
VSX2P58304 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
VSX2P58304 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.28□□□□□ -1.56
VSX2P58304 AC022467.1-201ENST00000614738 749 ntBASIC5.28□□□□□ -1.56
VSX2P58304 AC007204.2-201ENST00000615022 616 ntBASIC5.28□□□□□ -1.56
VSX2P58304 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 AC005840.5-201ENST00000619166 599 ntBASIC5.28□□□□□ -1.56
VSX2P58304 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.28□□□□□ -1.56
VSX2P58304 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
VSX2P58304 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.28□□□□□ -1.56
VSX2P58304 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.28□□□□□ -1.56
VSX2P58304 LINC01963-201ENST00000562038 3148 ntBASIC5.28□□□□□ -1.56
VSX2P58304 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VSX2P58304 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.28□□□□□ -1.56
VSX2P58304 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
VSX2P58304 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
VSX2P58304 NR1H5P-201ENST00000452683 1377 ntBASIC5.28□□□□□ -1.56
VSX2P58304 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
VSX2P58304 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VSX2P58304 AL137058.3-201ENST00000624531 3099 ntBASIC5.27□□□□□ -1.57
VSX2P58304 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.27□□□□□ -1.57
VSX2P58304 AC020633.1-201ENST00000468439 2247 ntBASIC5.27□□□□□ -1.57
VSX2P58304 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
VSX2P58304 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VSX2P58304 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VSX2P58304 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
VSX2P58304 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.27□□□□□ -1.57
VSX2P58304 AL391361.1-201ENST00000405580 489 ntBASIC5.27□□□□□ -1.57
VSX2P58304 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VSX2P58304 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VSX2P58304 AC007161.1-204ENST00000423039 460 ntBASIC5.27□□□□□ -1.57
VSX2P58304 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.27□□□□□ -1.57
VSX2P58304 BX119904.3-201ENST00000428194 957 ntBASIC5.27□□□□□ -1.57
VSX2P58304 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.27□□□□□ -1.57
VSX2P58304 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.27□□□□□ -1.57
VSX2P58304 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.27□□□□□ -1.57
VSX2P58304 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.27□□□□□ -1.57
VSX2P58304 AL133445.1-201ENST00000467051 452 ntBASIC5.27□□□□□ -1.57
VSX2P58304 AC074386.1-201ENST00000476560 767 ntBASIC5.27□□□□□ -1.57
VSX2P58304 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.27□□□□□ -1.57
VSX2P58304 EIF1P7-201ENST00000487533 337 ntBASIC5.27□□□□□ -1.57
VSX2P58304 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.27□□□□□ -1.57
VSX2P58304 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms