Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC079064.1-201ENST00000528365 362 ntBASIC7.1□□□□□ -1.27
RIPK4P57078 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.1□□□□□ -1.27
RIPK4P57078 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RIPK4P57078 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC7.1□□□□□ -1.27
RIPK4P57078 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC7.1□□□□□ -1.27
RIPK4P57078 AL139124.1-201ENST00000609123 421 ntBASIC7.1□□□□□ -1.27
RIPK4P57078 AC005618.4-201ENST00000625053 554 ntBASIC7.1□□□□□ -1.27
RIPK4P57078 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RIPK4P57078 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
RIPK4P57078 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RIPK4P57078 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RIPK4P57078 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RIPK4P57078 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
RIPK4P57078 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC7.1□□□□□ -1.27
RIPK4P57078 AC007938.2-201ENST00000604666 2634 ntBASIC7.1□□□□□ -1.27
RIPK4P57078 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RIPK4P57078 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RIPK4P57078 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RIPK4P57078 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RIPK4P57078 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
RIPK4P57078 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.09□□□□□ -1.27
RIPK4P57078 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
RIPK4P57078 AC005522.1-201ENST00000395416 346 ntBASIC7.09□□□□□ -1.27
RIPK4P57078 DBIP1-201ENST00000401435 260 ntBASIC7.09□□□□□ -1.27
RIPK4P57078 PPIAP9-201ENST00000403866 498 ntBASIC7.09□□□□□ -1.27
RIPK4P57078 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.09□□□□□ -1.27
RIPK4P57078 PSAT1P4-201ENST00000466500 526 ntBASIC7.09□□□□□ -1.27
RIPK4P57078 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC7.09□□□□□ -1.27
RIPK4P57078 NPM1P28-201ENST00000492269 840 ntBASIC7.09□□□□□ -1.27
RIPK4P57078 RN7SL447P-201ENST00000494711 245 ntBASIC7.09□□□□□ -1.27
RIPK4P57078 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC7.09□□□□□ -1.27
RIPK4P57078 SCARNA20.4-201ENST00000516969 131 ntBASIC7.09□□□□□ -1.27
RIPK4P57078 HMGB1P40-201ENST00000525121 540 ntBASIC7.09□□□□□ -1.27
RIPK4P57078 OR8Q1P-201ENST00000526467 655 ntBASIC7.09□□□□□ -1.27
RIPK4P57078 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
RIPK4P57078 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.09□□□□□ -1.27
RIPK4P57078 RPL10P14-201ENST00000565265 298 ntBASIC7.09□□□□□ -1.27
RIPK4P57078 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC7.09□□□□□ -1.27
RIPK4P57078 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.09□□□□□ -1.27
RIPK4P57078 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC7.09□□□□□ -1.27
RIPK4P57078 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RIPK4P57078 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.09□□□□□ -1.27
RIPK4P57078 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RIPK4P57078 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.09□□□□□ -1.27
RIPK4P57078 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
RIPK4P57078 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
RIPK4P57078 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.08□□□□□ -1.28
RIPK4P57078 CR788268.1-201ENST00000603931 1809 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 AC100757.1-201ENST00000616872 1835 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.08□□□□□ -1.28
RIPK4P57078 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.08□□□□□ -1.28
RIPK4P57078 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RIPK4P57078 AC092681.1-201ENST00000297369 291 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 RNA5SP453-201ENST00000362503 119 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 MIR1178-201ENST00000408396 91 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC7.08□□□□□ -1.28
RIPK4P57078 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RIPK4P57078 AC074386.1-201ENST00000476560 767 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 AC058823.1-201ENST00000485315 474 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 RNA5SP373-201ENST00000517271 95 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.08□□□□□ -1.28
RIPK4P57078 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.08□□□□□ -1.28
RIPK4P57078 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RIPK4P57078 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC7.08□□□□□ -1.28
RIPK4P57078 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.08□□□□□ -1.28
RIPK4P57078 AC106730.2-201ENST00000566641 540 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 AC005341.1-201ENST00000571086 708 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 SUMO2P15-201ENST00000604285 278 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 WBP1LP8-201ENST00000617401 327 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 AL157762.1-201ENST00000619612 415 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.08□□□□□ -1.28
RIPK4P57078 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
RIPK4P57078 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
RIPK4P57078 BCORP1-203ENST00000513194 5093 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
RIPK4P57078 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RIPK4P57078 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC7.08□□□□□ -1.28
RIPK4P57078 AC003973.3-201ENST00000624863 2822 ntBASIC7.08□□□□□ -1.28
RIPK4P57078 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
RIPK4P57078 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
RIPK4P57078 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC7.08□□□□□ -1.28
RIPK4P57078 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
RIPK4P57078 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RIPK4P57078 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
RIPK4P57078 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
RIPK4P57078 AL078621.3-201ENST00000623707 2042 ntBASIC7.07□□□□□ -1.28
RIPK4P57078 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RIPK4P57078 PABPC1P6-201ENST00000445594 1829 ntBASIC7.07□□□□□ -1.28
RIPK4P57078 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RIPK4P57078 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RIPK4P57078 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RIPK4P57078 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.07□□□□□ -1.28
RIPK4P57078 FAM96AP1-201ENST00000430879 482 ntBASIC7.07□□□□□ -1.28
RIPK4P57078 AC099670.2-201ENST00000435130 321 ntBASIC7.07□□□□□ -1.28
RIPK4P57078 GAPDHP25-201ENST00000447061 1001 ntBASIC7.07□□□□□ -1.28
RIPK4P57078 RPS21P4-201ENST00000487122 248 ntBASIC7.07□□□□□ -1.28
RIPK4P57078 RPS4XP14-201ENST00000493072 781 ntBASIC7.07□□□□□ -1.28
RIPK4P57078 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms