Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AP001357.1-201ENST00000586304 1053 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 AC025857.2-201ENST00000602711 238 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 AC015802.5-201ENST00000607478 399 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 AC129915.3-201ENST00000634128 948 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HDAC4P56524 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HDAC4P56524 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.03□□□□□ -1.44
HDAC4P56524 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.03□□□□□ -1.44
HDAC4P56524 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HDAC4P56524 AC117409.1-201ENST00000470499 1310 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC4P56524 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HDAC4P56524 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC4P56524 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC4P56524 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC4P56524 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC4P56524 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC4P56524 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC4P56524 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
HDAC4P56524 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
HDAC4P56524 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 RN7SKP279-201ENST00000411383 298 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AC019205.1-201ENST00000421830 730 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AL035660.1-201ENST00000422041 222 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.02□□□□□ -1.45
HDAC4P56524 AL356806.1-201ENST00000422524 916 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AL590623.1-201ENST00000427864 105 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HDAC4P56524 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.02□□□□□ -1.45
HDAC4P56524 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.02□□□□□ -1.45
HDAC4P56524 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.02□□□□□ -1.45
HDAC4P56524 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.02□□□□□ -1.45
HDAC4P56524 RPS17P15-201ENST00000475609 349 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.02□□□□□ -1.45
HDAC4P56524 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.02□□□□□ -1.45
HDAC4P56524 RNU6-467P-201ENST00000517027 110 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.02□□□□□ -1.45
HDAC4P56524 NANOGNBP2-201ENST00000544753 553 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HDAC4P56524 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.02□□□□□ -1.45
HDAC4P56524 AC096996.1-201ENST00000563813 325 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.02□□□□□ -1.45
HDAC4P56524 ADAD1P2-201ENST00000588476 646 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.02□□□□□ -1.45
HDAC4P56524 COX6CP7-201ENST00000597056 208 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AL138895.2-201ENST00000603019 178 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AC005972.3-201ENST00000606304 481 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AL365181.4-201ENST00000609800 547 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC4P56524 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.02□□□□□ -1.45
HDAC4P56524 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.02□□□□□ -1.45
HDAC4P56524 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
HDAC4P56524 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.02□□□□□ -1.45
HDAC4P56524 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC4P56524 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
HDAC4P56524 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.02□□□□□ -1.45
HDAC4P56524 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HDAC4P56524 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.02□□□□□ -1.45
HDAC4P56524 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
HDAC4P56524 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.01□□□□□ -1.45
HDAC4P56524 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 AL355488.2-201ENST00000609909 2850 ntBASIC6.01□□□□□ -1.45
HDAC4P56524 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
HDAC4P56524 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.01□□□□□ -1.45
HDAC4P56524 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.01□□□□□ -1.45
HDAC4P56524 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HDAC4P56524 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HDAC4P56524 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 LYPLA1P3-201ENST00000402650 695 ntBASIC6.01□□□□□ -1.45
HDAC4P56524 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.01□□□□□ -1.45
HDAC4P56524 AL512504.1-201ENST00000415494 778 ntBASIC6.01□□□□□ -1.45
HDAC4P56524 RCC2P2-201ENST00000422174 918 ntBASIC6.01□□□□□ -1.45
HDAC4P56524 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 MTCO3P43-201ENST00000440974 771 ntBASIC6.01□□□□□ -1.45
HDAC4P56524 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.01□□□□□ -1.45
HDAC4P56524 AC093719.1-201ENST00000480427 441 ntBASIC6.01□□□□□ -1.45
HDAC4P56524 PDCL3P4-201ENST00000489621 720 ntBASIC6.01□□□□□ -1.45
HDAC4P56524 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.01□□□□□ -1.45
HDAC4P56524 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.01□□□□□ -1.45
HDAC4P56524 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.01□□□□□ -1.45
HDAC4P56524 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.01□□□□□ -1.45
HDAC4P56524 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.01□□□□□ -1.45
HDAC4P56524 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.01□□□□□ -1.45
HDAC4P56524 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.01□□□□□ -1.45
HDAC4P56524 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.01□□□□□ -1.45
HDAC4P56524 AC012146.2-201ENST00000576545 416 ntBASIC6.01□□□□□ -1.45
HDAC4P56524 AC060780.2-201ENST00000589047 198 ntBASIC6.01□□□□□ -1.45
HDAC4P56524 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HDAC4P56524 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms