Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC090079.2-201ENST00000575289 768 ntBASIC5.24□□□□□ -1.57
CDH11P55287 AP005119.1-201ENST00000580956 292 ntBASIC5.24□□□□□ -1.57
CDH11P55287 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH11P55287 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH11P55287 NANOGP3-201ENST00000605855 286 ntBASIC5.24□□□□□ -1.57
CDH11P55287 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.24□□□□□ -1.57
CDH11P55287 MIR6793-201ENST00000612376 63 ntBASIC5.24□□□□□ -1.57
CDH11P55287 AL162233.1-201ENST00000620014 944 ntBASIC5.24□□□□□ -1.57
CDH11P55287 AL136228.1-201ENST00000622221 319 ntBASIC5.24□□□□□ -1.57
CDH11P55287 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CDH11P55287 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH11P55287 AC091305.2-201ENST00000624049 1576 ntBASIC5.24□□□□□ -1.57
CDH11P55287 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
CDH11P55287 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CDH11P55287 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH11P55287 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.24□□□□□ -1.57
CDH11P55287 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH11P55287 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH11P55287 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH11P55287 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH11P55287 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH11P55287 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH11P55287 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH11P55287 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CDH11P55287 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH11P55287 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CDH11P55287 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH11P55287 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDH11P55287 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH11P55287 TMSB4XP2-201ENST00000335179 210 ntBASIC5.23□□□□□ -1.57
CDH11P55287 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDH11P55287 AL358178.1-201ENST00000407698 397 ntBASIC5.23□□□□□ -1.57
CDH11P55287 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.23□□□□□ -1.57
CDH11P55287 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.23□□□□□ -1.57
CDH11P55287 OR10T1P-201ENST00000424327 947 ntBASIC5.23□□□□□ -1.57
CDH11P55287 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH11P55287 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH11P55287 CDY8P-201ENST00000428380 1279 ntBASIC5.23□□□□□ -1.57
CDH11P55287 MRPS33P4-201ENST00000434892 317 ntBASIC5.23□□□□□ -1.57
CDH11P55287 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH11P55287 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH11P55287 CDY20P-201ENST00000447528 1279 ntBASIC5.23□□□□□ -1.57
CDH11P55287 AL445466.1-201ENST00000448432 357 ntBASIC5.23□□□□□ -1.57
CDH11P55287 MORF4L1P4-201ENST00000450245 976 ntBASIC5.23□□□□□ -1.57
CDH11P55287 MEMO1P4-201ENST00000453590 386 ntBASIC5.23□□□□□ -1.57
CDH11P55287 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH11P55287 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH11P55287 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH11P55287 AC105420.1-201ENST00000504389 582 ntBASIC5.23□□□□□ -1.57
CDH11P55287 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH11P55287 AC105384.2-201ENST00000508433 640 ntBASIC5.23□□□□□ -1.57
CDH11P55287 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH11P55287 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH11P55287 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH11P55287 AC005000.1-201ENST00000536192 288 ntBASIC5.23□□□□□ -1.57
CDH11P55287 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH11P55287 AC079600.1-201ENST00000550326 297 ntBASIC5.23□□□□□ -1.57
CDH11P55287 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH11P55287 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH11P55287 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH11P55287 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH11P55287 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH11P55287 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH11P55287 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH11P55287 AP002371.2-201ENST00000624450 503 ntBASIC5.23□□□□□ -1.57
CDH11P55287 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CDH11P55287 AF287957.1-201ENST00000607368 1595 ntBASIC5.23□□□□□ -1.57
CDH11P55287 AC006484.1-201ENST00000435086 1884 ntBASIC5.23□□□□□ -1.57
CDH11P55287 GNL2P1-201ENST00000451274 2190 ntBASIC5.23□□□□□ -1.57
CDH11P55287 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
CDH11P55287 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH11P55287 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CDH11P55287 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.23□□□□□ -1.57
CDH11P55287 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH11P55287 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CDH11P55287 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH11P55287 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH11P55287 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH11P55287 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH11P55287 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CDH11P55287 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH11P55287 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CDH11P55287 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.22□□□□□ -1.57
CDH11P55287 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
CDH11P55287 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH11P55287 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDH11P55287 AL353625.1-202ENST00000366273 571 ntBASIC5.22□□□□□ -1.57
CDH11P55287 OR6K3-202ENST00000368146 996 ntBASIC5.22□□□□□ -1.57
CDH11P55287 SNORA70.6-201ENST00000383934 134 ntBASIC5.22□□□□□ -1.57
CDH11P55287 SNORA17A-201ENST00000391185 133 ntBASIC5.22□□□□□ -1.57
CDH11P55287 AL031985.1-201ENST00000392713 418 ntBASIC5.22□□□□□ -1.57
CDH11P55287 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH11P55287 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH11P55287 RNU2-72P-201ENST00000411175 163 ntBASIC5.22□□□□□ -1.57
CDH11P55287 FAR1P1-201ENST00000427163 934 ntBASIC5.22□□□□□ -1.57
CDH11P55287 EIF2S2P3-201ENST00000428356 999 ntBASIC5.22□□□□□ -1.57
CDH11P55287 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH11P55287 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH11P55287 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH11P55287 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms