Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK2P53671 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK2P53671 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK2P53671 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK2P53671 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
LIMK2P53671 GAPDHP24-201ENST00000328713 983 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 U3.23-201ENST00000391132 200 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 NPM1P37-201ENST00000403105 874 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 RPS6P23-201ENST00000413224 722 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 AL596448.1-201ENST00000415024 392 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.6□□□□□ -1.51
LIMK2P53671 RIMKLBP2-201ENST00000424737 654 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 AC073465.2-201ENST00000440938 498 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 EEF1B2P6-201ENST00000445713 673 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.6□□□□□ -1.51
LIMK2P53671 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.6□□□□□ -1.51
LIMK2P53671 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK2P53671 AC110749.1-201ENST00000462007 357 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 PSAT1P4-201ENST00000466500 526 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 RN7SL188P-201ENST00000469842 285 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.6□□□□□ -1.51
LIMK2P53671 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK2P53671 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.6□□□□□ -1.51
LIMK2P53671 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.6□□□□□ -1.51
LIMK2P53671 AL049872.1-201ENST00000556323 322 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 DPPA2P4-201ENST00000563717 878 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.6□□□□□ -1.51
LIMK2P53671 AC009237.13-201ENST00000603193 276 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.6□□□□□ -1.51
LIMK2P53671 AC007683.2-201ENST00000624681 714 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 AP000550.3-201ENST00000637734 379 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK2P53671 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
LIMK2P53671 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK2P53671 ABCC13-202ENST00000463099 3842 ntBASIC5.6□□□□□ -1.51
LIMK2P53671 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.6□□□□□ -1.51
LIMK2P53671 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
LIMK2P53671 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
LIMK2P53671 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.6□□□□□ -1.51
LIMK2P53671 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK2P53671 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.59□□□□□ -1.51
LIMK2P53671 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK2P53671 AP001029.2-203ENST00000589795 4910 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.59□□□□□ -1.51
LIMK2P53671 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.59□□□□□ -1.51
LIMK2P53671 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.59□□□□□ -1.51
LIMK2P53671 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK2P53671 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.59□□□□□ -1.51
LIMK2P53671 AL359715.3-201ENST00000569267 2123 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.59□□□□□ -1.51
LIMK2P53671 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK2P53671 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK2P53671 SNORA5.1-201ENST00000384275 131 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 AL391422.1-201ENST00000402155 436 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK2P53671 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.59□□□□□ -1.51
LIMK2P53671 BMS1P13-201ENST00000417301 885 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.59□□□□□ -1.51
LIMK2P53671 AC013268.2-201ENST00000420753 337 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 SETP9-201ENST00000423837 832 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 MRPS21P2-201ENST00000424704 264 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.59□□□□□ -1.51
LIMK2P53671 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.59□□□□□ -1.51
LIMK2P53671 LYPLA1P1-201ENST00000434514 622 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 AC005297.1-201ENST00000444765 862 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 AZGP1P2-201ENST00000454506 345 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 AC026348.1-201ENST00000462549 1053 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
LIMK2P53671 AC021106.1-201ENST00000509020 1058 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.59□□□□□ -1.51
LIMK2P53671 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
LIMK2P53671 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.59□□□□□ -1.51
LIMK2P53671 AC027308.1-201ENST00000517993 110 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 IGKV2-18-201ENST00000522607 343 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 AC079064.1-201ENST00000528365 362 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.59□□□□□ -1.51
LIMK2P53671 MIR7853-201ENST00000584820 132 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 AC063977.5-201ENST00000601044 974 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.59□□□□□ -1.51
LIMK2P53671 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.59□□□□□ -1.51
LIMK2P53671 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.59□□□□□ -1.51
LIMK2P53671 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.59□□□□□ -1.51
LIMK2P53671 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.59□□□□□ -1.51
LIMK2P53671 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.59□□□□□ -1.51
LIMK2P53671 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LIMK2P53671 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.59□□□□□ -1.51
LIMK2P53671 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
LIMK2P53671 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LIMK2P53671 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
LIMK2P53671 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
LIMK2P53671 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
LIMK2P53671 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.59□□□□□ -1.52
LIMK2P53671 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK2P53671 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK2P53671 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK2P53671 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LIMK2P53671 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms