Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LHX1P48742 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 AC025470.1-201ENST00000510053 2032 ntBASIC5.84□□□□□ -1.47
LHX1P48742 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 CR788268.1-201ENST00000603931 1809 ntBASIC5.84□□□□□ -1.47
LHX1P48742 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
LHX1P48742 RN7SKP17-201ENST00000411242 351 ntBASIC5.84□□□□□ -1.47
LHX1P48742 GTF3AP1-201ENST00000416942 1004 ntBASIC5.84□□□□□ -1.47
LHX1P48742 RPL34P27-201ENST00000428810 349 ntBASIC5.84□□□□□ -1.47
LHX1P48742 RPL12P17-201ENST00000432393 498 ntBASIC5.84□□□□□ -1.47
LHX1P48742 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.84□□□□□ -1.47
LHX1P48742 LINC02210-201ENST00000444561 288 ntBASIC5.84□□□□□ -1.47
LHX1P48742 AL672138.1-201ENST00000450604 1015 ntBASIC5.84□□□□□ -1.47
LHX1P48742 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.84□□□□□ -1.47
LHX1P48742 OR52Y1P-201ENST00000452418 828 ntBASIC5.84□□□□□ -1.47
LHX1P48742 DEFB109A-201ENST00000482450 265 ntBASIC5.84□□□□□ -1.47
LHX1P48742 HMGB1P44-201ENST00000508597 572 ntBASIC5.84□□□□□ -1.47
LHX1P48742 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.84□□□□□ -1.47
LHX1P48742 MTND6P2-201ENST00000512226 524 ntBASIC5.84□□□□□ -1.47
LHX1P48742 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.84□□□□□ -1.47
LHX1P48742 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.84□□□□□ -1.47
LHX1P48742 GTF2IP11-201ENST00000526931 420 ntBASIC5.84□□□□□ -1.47
LHX1P48742 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.84□□□□□ -1.47
LHX1P48742 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.84□□□□□ -1.47
LHX1P48742 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.84□□□□□ -1.47
LHX1P48742 AC092944.2-201ENST00000605443 889 ntBASIC5.84□□□□□ -1.47
LHX1P48742 AL512624.1-201ENST00000613638 469 ntBASIC5.84□□□□□ -1.47
LHX1P48742 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.84□□□□□ -1.47
LHX1P48742 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
LHX1P48742 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 AC232271.1-201ENST00000602455 2715 ntBASIC5.84□□□□□ -1.47
LHX1P48742 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 CDY11P-201ENST00000447168 1651 ntBASIC5.84□□□□□ -1.47
LHX1P48742 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LHX1P48742 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.84□□□□□ -1.48
LHX1P48742 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.84□□□□□ -1.48
LHX1P48742 Z95114.1-201ENST00000624264 14574 ntBASIC5.84□□□□□ -1.48
LHX1P48742 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.84□□□□□ -1.48
LHX1P48742 RARSP1-201ENST00000542842 1418 ntBASIC5.83□□□□□ -1.48
LHX1P48742 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LHX1P48742 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.83□□□□□ -1.48
LHX1P48742 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.83□□□□□ -1.48
LHX1P48742 AL360270.2-201ENST00000562952 5985 ntBASIC5.83□□□□□ -1.48
LHX1P48742 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.83□□□□□ -1.48
LHX1P48742 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LHX1P48742 RNA5SP335-201ENST00000363817 110 ntBASIC5.83□□□□□ -1.48
LHX1P48742 AL589994.1-201ENST00000404962 340 ntBASIC5.83□□□□□ -1.48
LHX1P48742 MIR1286-201ENST00000408112 78 ntBASIC5.83□□□□□ -1.48
LHX1P48742 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.83□□□□□ -1.48
LHX1P48742 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.83□□□□□ -1.48
LHX1P48742 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.83□□□□□ -1.48
LHX1P48742 AL133325.1-201ENST00000421090 382 ntBASIC5.83□□□□□ -1.48
LHX1P48742 PRUNEP1-201ENST00000425846 705 ntBASIC5.83□□□□□ -1.48
LHX1P48742 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.83□□□□□ -1.48
LHX1P48742 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.83□□□□□ -1.48
LHX1P48742 AC074386.1-201ENST00000476560 767 ntBASIC5.83□□□□□ -1.48
LHX1P48742 RN7SL629P-201ENST00000489622 285 ntBASIC5.83□□□□□ -1.48
LHX1P48742 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.83□□□□□ -1.48
LHX1P48742 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LHX1P48742 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.83□□□□□ -1.48
LHX1P48742 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.83□□□□□ -1.48
LHX1P48742 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.83□□□□□ -1.48
LHX1P48742 AC027026.1-201ENST00000532323 742 ntBASIC5.83□□□□□ -1.48
LHX1P48742 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.83□□□□□ -1.48
LHX1P48742 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.83□□□□□ -1.48
LHX1P48742 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.83□□□□□ -1.48
LHX1P48742 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.83□□□□□ -1.48
LHX1P48742 AP005403.1-201ENST00000579720 229 ntBASIC5.83□□□□□ -1.48
LHX1P48742 AC009303.3-201ENST00000591103 736 ntBASIC5.83□□□□□ -1.48
LHX1P48742 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.83□□□□□ -1.48
LHX1P48742 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.83□□□□□ -1.48
LHX1P48742 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.83□□□□□ -1.48
LHX1P48742 AC015712.7-201ENST00000615211 635 ntBASIC5.83□□□□□ -1.48
LHX1P48742 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.83□□□□□ -1.48
LHX1P48742 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.83□□□□□ -1.48
LHX1P48742 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LHX1P48742 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.83□□□□□ -1.48
LHX1P48742 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LHX1P48742 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.83□□□□□ -1.48
LHX1P48742 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LHX1P48742 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LHX1P48742 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
LHX1P48742 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.83□□□□□ -1.48
LHX1P48742 AL132656.3-201ENST00000606384 1595 ntBASIC5.83□□□□□ -1.48
LHX1P48742 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LHX1P48742 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LHX1P48742 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LHX1P48742 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
LHX1P48742 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
LHX1P48742 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 233.3 ms