Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCC3P46736 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCC3P46736 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
BRCC3P46736 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.82□□□□□ -1.48
BRCC3P46736 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BRCC3P46736 AC092070.2-203ENST00000598377 3644 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
BRCC3P46736 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCC3P46736 RPL23P2-201ENST00000320371 421 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BRCC3P46736 SNORA74A-201ENST00000364089 198 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 AC016769.2-201ENST00000414815 475 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 METTL15P3-201ENST00000415522 1221 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.82□□□□□ -1.48
BRCC3P46736 AC108075.1-201ENST00000424692 529 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.82□□□□□ -1.48
BRCC3P46736 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.82□□□□□ -1.48
BRCC3P46736 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.82□□□□□ -1.48
BRCC3P46736 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.82□□□□□ -1.48
BRCC3P46736 AZGP1P2-201ENST00000454506 345 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.82□□□□□ -1.48
BRCC3P46736 HMGB1P44-201ENST00000508597 572 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 ST13P12-201ENST00000508958 1094 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 GAPDHP62-201ENST00000515313 990 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.82□□□□□ -1.48
BRCC3P46736 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.82□□□□□ -1.48
BRCC3P46736 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
BRCC3P46736 AC060766.1-201ENST00000590824 627 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 AP000769.2-201ENST00000602344 396 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 AL445222.1-201ENST00000607259 628 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 AC126915.2-201ENST00000610957 190 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCC3P46736 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.82□□□□□ -1.48
BRCC3P46736 CYP4F35P-202ENST00000636121 390 ntBASIC5.82□□□□□ -1.48
BRCC3P46736 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
BRCC3P46736 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BRCC3P46736 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
BRCC3P46736 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BRCC3P46736 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCC3P46736 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
BRCC3P46736 BX284613.1-201ENST00000452221 1641 ntBASIC5.81□□□□□ -1.48
BRCC3P46736 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
BRCC3P46736 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BRCC3P46736 KYNUP3-201ENST00000574386 1341 ntBASIC5.81□□□□□ -1.48
BRCC3P46736 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.81□□□□□ -1.48
BRCC3P46736 RNU1-43P-201ENST00000365052 165 ntBASIC5.81□□□□□ -1.48
BRCC3P46736 RNU1-149P-201ENST00000390870 161 ntBASIC5.81□□□□□ -1.48
BRCC3P46736 OR10T1P-201ENST00000424327 947 ntBASIC5.81□□□□□ -1.48
BRCC3P46736 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.81□□□□□ -1.48
BRCC3P46736 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.81□□□□□ -1.48
BRCC3P46736 REG1CP-206ENST00000447469 496 ntBASIC5.81□□□□□ -1.48
BRCC3P46736 AC009963.4-201ENST00000448535 339 ntBASIC5.81□□□□□ -1.48
BRCC3P46736 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BRCC3P46736 RPS18P6-201ENST00000476880 458 ntBASIC5.81□□□□□ -1.48
BRCC3P46736 RN7SL808P-201ENST00000496066 299 ntBASIC5.81□□□□□ -1.48
BRCC3P46736 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BRCC3P46736 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.81□□□□□ -1.48
BRCC3P46736 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.81□□□□□ -1.48
BRCC3P46736 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.81□□□□□ -1.48
BRCC3P46736 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.81□□□□□ -1.48
BRCC3P46736 AC127381.1-201ENST00000555979 939 ntBASIC5.81□□□□□ -1.48
BRCC3P46736 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.81□□□□□ -1.48
BRCC3P46736 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.81□□□□□ -1.48
BRCC3P46736 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BRCC3P46736 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.81□□□□□ -1.48
BRCC3P46736 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.81□□□□□ -1.48
BRCC3P46736 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.81□□□□□ -1.48
BRCC3P46736 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BRCC3P46736 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
BRCC3P46736 AC140134.1-201ENST00000511830 3544 ntBASIC5.81□□□□□ -1.48
BRCC3P46736 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
BRCC3P46736 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
BRCC3P46736 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BRCC3P46736 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.81□□□□□ -1.48
BRCC3P46736 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
BRCC3P46736 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
BRCC3P46736 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
BRCC3P46736 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BRCC3P46736 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BRCC3P46736 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.81□□□□□ -1.48
BRCC3P46736 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.8□□□□□ -1.48
BRCC3P46736 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
BRCC3P46736 CR383656.5-201ENST00000547616 1340 ntBASIC5.8□□□□□ -1.48
BRCC3P46736 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
BRCC3P46736 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.8□□□□□ -1.48
BRCC3P46736 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
BRCC3P46736 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
BRCC3P46736 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
BRCC3P46736 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
BRCC3P46736 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.8□□□□□ -1.48
BRCC3P46736 SNORA67-201ENST00000384423 137 ntBASIC5.8□□□□□ -1.48
BRCC3P46736 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
BRCC3P46736 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.8□□□□□ -1.48
BRCC3P46736 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.8□□□□□ -1.48
BRCC3P46736 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.8□□□□□ -1.48
BRCC3P46736 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.8□□□□□ -1.48
BRCC3P46736 RPL7P56-201ENST00000429441 717 ntBASIC5.8□□□□□ -1.48
BRCC3P46736 AL590399.4-201ENST00000436561 601 ntBASIC5.8□□□□□ -1.48
BRCC3P46736 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms