Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SHMT2P34897 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.4□□□□□ -1.54
SHMT2P34897 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHMT2P34897 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHMT2P34897 RN7SKP124-201ENST00000364730 341 ntBASIC5.4□□□□□ -1.54
SHMT2P34897 RN7SKP28-201ENST00000364770 305 ntBASIC5.4□□□□□ -1.54
SHMT2P34897 RN7SKP6-201ENST00000364795 319 ntBASIC5.4□□□□□ -1.54
SHMT2P34897 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.4□□□□□ -1.54
SHMT2P34897 NACAP7-201ENST00000407371 609 ntBASIC5.4□□□□□ -1.54
SHMT2P34897 GPS2P1-201ENST00000411761 986 ntBASIC5.4□□□□□ -1.54
SHMT2P34897 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.4□□□□□ -1.54
SHMT2P34897 OR6D1P-201ENST00000436165 939 ntBASIC5.4□□□□□ -1.54
SHMT2P34897 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.4□□□□□ -1.54
SHMT2P34897 SNORD125-201ENST00000459538 96 ntBASIC5.4□□□□□ -1.54
SHMT2P34897 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.4□□□□□ -1.54
SHMT2P34897 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.4□□□□□ -1.54
SHMT2P34897 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.4□□□□□ -1.54
SHMT2P34897 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.4□□□□□ -1.54
SHMT2P34897 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.4□□□□□ -1.54
SHMT2P34897 AC116158.1-201ENST00000560231 2129 ntBASIC5.4□□□□□ -1.54
SHMT2P34897 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.4□□□□□ -1.54
SHMT2P34897 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
SHMT2P34897 AC012616.1-201ENST00000600294 197 ntBASIC5.4□□□□□ -1.54
SHMT2P34897 AL355480.1-201ENST00000629041 99 ntBASIC5.4□□□□□ -1.54
SHMT2P34897 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SHMT2P34897 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.4□□□□□ -1.55
SHMT2P34897 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SHMT2P34897 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.4□□□□□ -1.55
SHMT2P34897 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.4□□□□□ -1.55
SHMT2P34897 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.4□□□□□ -1.55
SHMT2P34897 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.4□□□□□ -1.55
SHMT2P34897 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.4□□□□□ -1.55
SHMT2P34897 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SHMT2P34897 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHMT2P34897 OR9K1P-202ENST00000641111 3217 ntBASIC5.4□□□□□ -1.55
SHMT2P34897 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHMT2P34897 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHMT2P34897 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
SHMT2P34897 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHMT2P34897 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHMT2P34897 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHMT2P34897 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SHMT2P34897 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHMT2P34897 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHMT2P34897 AC007938.2-201ENST00000604666 2634 ntBASIC5.39□□□□□ -1.55
SHMT2P34897 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SHMT2P34897 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHMT2P34897 RNA5SP319-201ENST00000362768 119 ntBASIC5.39□□□□□ -1.55
SHMT2P34897 RNA5SP326-201ENST00000363209 110 ntBASIC5.39□□□□□ -1.55
SHMT2P34897 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.39□□□□□ -1.55
SHMT2P34897 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHMT2P34897 Z93019.1-201ENST00000416450 973 ntBASIC5.39□□□□□ -1.55
SHMT2P34897 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.39□□□□□ -1.55
SHMT2P34897 AC009784.1-201ENST00000426484 460 ntBASIC5.39□□□□□ -1.55
SHMT2P34897 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHMT2P34897 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.39□□□□□ -1.55
SHMT2P34897 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.39□□□□□ -1.55
SHMT2P34897 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHMT2P34897 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.39□□□□□ -1.55
SHMT2P34897 RNA5SP362-201ENST00000516048 118 ntBASIC5.39□□□□□ -1.55
SHMT2P34897 RN7SKP253-201ENST00000516424 309 ntBASIC5.39□□□□□ -1.55
SHMT2P34897 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.39□□□□□ -1.55
SHMT2P34897 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.39□□□□□ -1.55
SHMT2P34897 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.39□□□□□ -1.55
SHMT2P34897 AC018809.2-201ENST00000602436 3823 ntBASIC5.39□□□□□ -1.55
SHMT2P34897 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.39□□□□□ -1.55
SHMT2P34897 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.39□□□□□ -1.55
SHMT2P34897 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHMT2P34897 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHMT2P34897 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHMT2P34897 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.39□□□□□ -1.55
SHMT2P34897 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
SHMT2P34897 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHMT2P34897 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHMT2P34897 CASC19-248ENST00000641674 1356 ntBASIC5.39□□□□□ -1.55
SHMT2P34897 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.39□□□□□ -1.55
SHMT2P34897 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHMT2P34897 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SHMT2P34897 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SHMT2P34897 AL360270.2-201ENST00000562952 5985 ntBASIC5.38□□□□□ -1.55
SHMT2P34897 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHMT2P34897 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
SHMT2P34897 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SHMT2P34897 AP005432.1-201ENST00000580891 3485 ntBASIC5.38□□□□□ -1.55
SHMT2P34897 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHMT2P34897 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SHMT2P34897 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SHMT2P34897 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHMT2P34897 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SHMT2P34897 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SHMT2P34897 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SHMT2P34897 U3.25-201ENST00000391209 220 ntBASIC5.38□□□□□ -1.55
SHMT2P34897 OR3A2-201ENST00000408891 1076 ntBASIC5.38□□□□□ -1.55
SHMT2P34897 HYALP1-201ENST00000417674 1279 ntBASIC5.38□□□□□ -1.55
SHMT2P34897 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.38□□□□□ -1.55
SHMT2P34897 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.38□□□□□ -1.55
SHMT2P34897 AC092106.1-201ENST00000444291 373 ntBASIC5.38□□□□□ -1.55
SHMT2P34897 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.38□□□□□ -1.55
SHMT2P34897 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.38□□□□□ -1.55
SHMT2P34897 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms