Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN3P26045 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN3P26045 MIR365B-201ENST00000362317 111 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN3P26045 U3.28-201ENST00000391249 210 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN3P26045 RIMKLBP2-201ENST00000424737 654 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 AC113412.1-201ENST00000425840 504 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN3P26045 KCTD9P1-201ENST00000430462 1167 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN3P26045 ARL4AP4-201ENST00000434170 518 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 SUMO2P3-201ENST00000438311 288 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 XKRYP6-201ENST00000440468 1116 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 XKRYP3-201ENST00000442113 1116 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 LRRC37A14P-201ENST00000452297 462 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 AL356390.1-201ENST00000455684 397 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 MTND6P32-201ENST00000457611 483 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN3P26045 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PTPN3P26045 OR4A17P-201ENST00000526032 904 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.68□□□□□ -1.5
PTPN3P26045 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN3P26045 H3F3BP2-201ENST00000583907 357 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 FAM60CP-201ENST00000591086 664 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN3P26045 AC009237.13-201ENST00000603193 276 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 MIR6133-201ENST00000617057 108 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN3P26045 AP001153.1-201ENST00000641024 338 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PTPN3P26045 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN3P26045 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
PTPN3P26045 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PTPN3P26045 AC003985.2-201ENST00000562268 1669 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 OR10AB1P-202ENST00000641219 1686 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PTPN3P26045 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN3P26045 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PTPN3P26045 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN3P26045 AC015689.2-201ENST00000528172 1738 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 AC007342.5-201ENST00000571340 2142 ntBASIC5.68□□□□□ -1.5
PTPN3P26045 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.68□□□□□ -1.5
PTPN3P26045 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN3P26045 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN3P26045 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PTPN3P26045 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN3P26045 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN3P26045 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN3P26045 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN3P26045 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN3P26045 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN3P26045 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN3P26045 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN3P26045 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN3P26045 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN3P26045 RN7SKP292-201ENST00000365522 317 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 AC083799.1-201ENST00000366451 910 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN3P26045 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PTPN3P26045 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN3P26045 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN3P26045 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN3P26045 EEF1B2P8-201ENST00000414101 671 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 ARAFP1-201ENST00000422172 605 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 IPPKP1-201ENST00000422501 768 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 AKR1B10P1-201ENST00000425765 942 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN3P26045 RPL7P56-201ENST00000429441 717 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN3P26045 ARAFP2-201ENST00000440565 559 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 MED28P3-201ENST00000444288 531 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN3P26045 VDAC2P4-201ENST00000452925 711 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 C1DP3-201ENST00000455013 423 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN3P26045 AC084754.1-201ENST00000463466 464 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 AC012123.2-201ENST00000485809 248 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.67□□□□□ -1.5
PTPN3P26045 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN3P26045 AC093815.1-201ENST00000508637 280 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 SNORD46.2-201ENST00000516021 102 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 CYCSP22-201ENST00000517555 339 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 IGBP1P1-201ENST00000554337 1009 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN3P26045 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN3P26045 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN3P26045 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN3P26045 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN3P26045 AL139124.1-201ENST00000609123 421 ntBASIC5.67□□□□□ -1.5
PTPN3P26045 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN3P26045 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN3P26045 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms