Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RNU6-1300P-201ENST00000391046 108 ntBASIC7.82□□□□□ -1.16
RFX1P22670 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.82□□□□□ -1.16
RFX1P22670 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.82□□□□□ -1.16
RFX1P22670 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC7.82□□□□□ -1.16
RFX1P22670 RPL24P2-201ENST00000421023 475 ntBASIC7.82□□□□□ -1.16
RFX1P22670 EIF1P1-201ENST00000421436 341 ntBASIC7.82□□□□□ -1.16
RFX1P22670 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.82□□□□□ -1.16
RFX1P22670 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.82□□□□□ -1.16
RFX1P22670 RPL23AP35-201ENST00000451906 501 ntBASIC7.82□□□□□ -1.16
RFX1P22670 AC019080.2-201ENST00000453859 394 ntBASIC7.82□□□□□ -1.16
RFX1P22670 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC7.82□□□□□ -1.16
RFX1P22670 RN7SL325P-201ENST00000460434 283 ntBASIC7.82□□□□□ -1.16
RFX1P22670 AC117395.2-201ENST00000463122 1128 ntBASIC7.82□□□□□ -1.16
RFX1P22670 AC021074.2-201ENST00000468434 172 ntBASIC7.82□□□□□ -1.16
RFX1P22670 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.82□□□□□ -1.16
RFX1P22670 AC008967.1-201ENST00000504843 163 ntBASIC7.82□□□□□ -1.16
RFX1P22670 ARL2BPP4-201ENST00000506854 471 ntBASIC7.82□□□□□ -1.16
RFX1P22670 AC006499.4-201ENST00000510947 694 ntBASIC7.82□□□□□ -1.16
RFX1P22670 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.82□□□□□ -1.16
RFX1P22670 RNA5SP135-201ENST00000517019 125 ntBASIC7.82□□□□□ -1.16
RFX1P22670 OR6C7P-201ENST00000547875 934 ntBASIC7.82□□□□□ -1.16
RFX1P22670 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.82□□□□□ -1.16
RFX1P22670 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.82□□□□□ -1.16
RFX1P22670 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.82□□□□□ -1.16
RFX1P22670 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.82□□□□□ -1.16
RFX1P22670 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC7.82□□□□□ -1.16
RFX1P22670 AC090312.2-201ENST00000582687 378 ntBASIC7.82□□□□□ -1.16
RFX1P22670 AC090525.3-201ENST00000605601 189 ntBASIC7.82□□□□□ -1.16
RFX1P22670 AC090186.1-201ENST00000605991 572 ntBASIC7.82□□□□□ -1.16
RFX1P22670 AC025048.6-202ENST00000627667 438 ntBASIC7.82□□□□□ -1.16
RFX1P22670 AL590396.3-201ENST00000636334 300 ntBASIC7.82□□□□□ -1.16
RFX1P22670 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.82□□□□□ -1.16
RFX1P22670 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
RFX1P22670 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
RFX1P22670 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.82□□□□□ -1.16
RFX1P22670 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RFX1P22670 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.81□□□□□ -1.16
RFX1P22670 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
RFX1P22670 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.81□□□□□ -1.16
RFX1P22670 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
RFX1P22670 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
RFX1P22670 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
RFX1P22670 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.81□□□□□ -1.16
RFX1P22670 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.81□□□□□ -1.16
RFX1P22670 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC7.81□□□□□ -1.16
RFX1P22670 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
RFX1P22670 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 RNU6-867P-201ENST00000364956 107 ntBASIC7.81□□□□□ -1.16
RFX1P22670 RNU6-1283P-201ENST00000365314 105 ntBASIC7.81□□□□□ -1.16
RFX1P22670 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
RFX1P22670 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 RNU6-316P-201ENST00000391027 107 ntBASIC7.81□□□□□ -1.16
RFX1P22670 CYCSP45-201ENST00000402289 315 ntBASIC7.81□□□□□ -1.16
RFX1P22670 MIR1303-201ENST00000408625 86 ntBASIC7.81□□□□□ -1.16
RFX1P22670 AL355862.1-201ENST00000412705 353 ntBASIC7.81□□□□□ -1.16
RFX1P22670 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RFX1P22670 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC7.81□□□□□ -1.16
RFX1P22670 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC7.81□□□□□ -1.16
RFX1P22670 TCEA1P3-201ENST00000443005 880 ntBASIC7.81□□□□□ -1.16
RFX1P22670 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.81□□□□□ -1.16
RFX1P22670 SSXP1-201ENST00000453640 473 ntBASIC7.81□□□□□ -1.16
RFX1P22670 RNU7-27P-201ENST00000459281 62 ntBASIC7.81□□□□□ -1.16
RFX1P22670 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7.81□□□□□ -1.16
RFX1P22670 AL035404.1-201ENST00000497982 568 ntBASIC7.81□□□□□ -1.16
RFX1P22670 AC098799.3-201ENST00000506095 438 ntBASIC7.81□□□□□ -1.16
RFX1P22670 RPL37P25-201ENST00000507308 276 ntBASIC7.81□□□□□ -1.16
RFX1P22670 AC138832.1-201ENST00000522871 556 ntBASIC7.81□□□□□ -1.16
RFX1P22670 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.81□□□□□ -1.16
RFX1P22670 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.81□□□□□ -1.16
RFX1P22670 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
RFX1P22670 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.81□□□□□ -1.16
RFX1P22670 RPS7P1-201ENST00000571702 585 ntBASIC7.81□□□□□ -1.16
RFX1P22670 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC7.81□□□□□ -1.16
RFX1P22670 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.81□□□□□ -1.16
RFX1P22670 AP004247.3-201ENST00000608682 624 ntBASIC7.81□□□□□ -1.16
RFX1P22670 AL121809.2-201ENST00000613169 341 ntBASIC7.81□□□□□ -1.16
RFX1P22670 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC7.81□□□□□ -1.16
RFX1P22670 AL162377.2-201ENST00000624532 337 ntBASIC7.81□□□□□ -1.16
RFX1P22670 AL357562.1-201ENST00000624911 609 ntBASIC7.81□□□□□ -1.16
RFX1P22670 TSHZ2-205ENST00000626626 670 ntBASIC7.81□□□□□ -1.16
RFX1P22670 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms