Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 HMGB1P45-201ENST00000435986 653 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 COX7BP2-201ENST00000437976 242 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.66□□□□□ -1.18
ERCC3P19447 AC016724.1-201ENST00000453215 421 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 ANKRD26P4-201ENST00000455755 950 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 RN7SL552P-201ENST00000462094 276 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.66□□□□□ -1.18
ERCC3P19447 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC7.66□□□□□ -1.18
ERCC3P19447 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
ERCC3P19447 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.66□□□□□ -1.18
ERCC3P19447 RNA5SP441-201ENST00000516809 88 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AC090819.1-201ENST00000523800 1111 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.66□□□□□ -1.18
ERCC3P19447 AC006512.2-201ENST00000543250 486 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 NIFKP8-201ENST00000560500 874 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC7.66□□□□□ -1.18
ERCC3P19447 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.66□□□□□ -1.18
ERCC3P19447 PDCD6IPP2-207ENST00000566321 1069 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AL078601.3-201ENST00000573303 535 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
ERCC3P19447 RN7SL199P-201ENST00000578752 281 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7.66□□□□□ -1.18
ERCC3P19447 RN7SL656P-201ENST00000579044 281 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 RN7SL270P-201ENST00000579643 281 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
ERCC3P19447 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.66□□□□□ -1.18
ERCC3P19447 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.66□□□□□ -1.18
ERCC3P19447 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AC022106.1-201ENST00000612834 766 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AC026951.2-201ENST00000613847 241 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AC034229.6-201ENST00000623704 224 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.66□□□□□ -1.18
ERCC3P19447 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.66□□□□□ -1.18
ERCC3P19447 MSL3P1-202ENST00000440028 1468 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.66□□□□□ -1.18
ERCC3P19447 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.66□□□□□ -1.18
ERCC3P19447 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 TMCC1P1-201ENST00000518897 1980 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.66□□□□□ -1.18
ERCC3P19447 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 LCOR-201ENST00000286067 4542 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
ERCC3P19447 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
ERCC3P19447 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
ERCC3P19447 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
ERCC3P19447 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
ERCC3P19447 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
ERCC3P19447 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
ERCC3P19447 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
ERCC3P19447 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
ERCC3P19447 RN7SKP269-201ENST00000365545 319 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC7.65□□□□□ -1.18
ERCC3P19447 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.65□□□□□ -1.18
ERCC3P19447 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
ERCC3P19447 Y_RNA.465-201ENST00000384293 102 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 YWHAZP6-201ENST00000399764 738 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 RPL7P58-201ENST00000402913 758 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 AL079342.2-201ENST00000403367 482 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC7.65□□□□□ -1.18
ERCC3P19447 AL663061.1-201ENST00000416625 580 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
ERCC3P19447 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.65□□□□□ -1.18
ERCC3P19447 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.65□□□□□ -1.18
ERCC3P19447 AC008753.1-201ENST00000423096 284 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
ERCC3P19447 AC099782.1-201ENST00000425889 474 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 AC234781.2-201ENST00000426370 994 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 AC239367.3-201ENST00000428996 814 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.65□□□□□ -1.18
ERCC3P19447 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.65□□□□□ -1.18
ERCC3P19447 PSMD10P2-201ENST00000432890 672 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 UBE2D3P1-201ENST00000436669 444 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.65□□□□□ -1.18
ERCC3P19447 DNAJC19P8-201ENST00000452887 259 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.65□□□□□ -1.18
ERCC3P19447 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.65□□□□□ -1.18
ERCC3P19447 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
ERCC3P19447 AP002884.1-201ENST00000479691 655 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.65□□□□□ -1.18
ERCC3P19447 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.65□□□□□ -1.18
ERCC3P19447 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC7.65□□□□□ -1.18
ERCC3P19447 RPF2P2-201ENST00000504693 896 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.65□□□□□ -1.18
ERCC3P19447 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.65□□□□□ -1.18
ERCC3P19447 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.65□□□□□ -1.18
ERCC3P19447 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.65□□□□□ -1.18
ERCC3P19447 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC7.65□□□□□ -1.18
ERCC3P19447 AC008015.1-201ENST00000555505 465 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 AL845552.1-201ENST00000556820 323 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.65□□□□□ -1.18
ERCC3P19447 AC109446.2-201ENST00000567872 497 ntBASIC7.65□□□□□ -1.18
ERCC3P19447 AC022884.3-201ENST00000579571 248 ntBASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms