Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6□□□□□ -1.45
TPM1P09493 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6□□□□□ -1.45
TPM1P09493 AC063977.5-201ENST00000601044 974 ntBASIC6□□□□□ -1.45
TPM1P09493 AC124916.2-201ENST00000604416 224 ntBASIC6□□□□□ -1.45
TPM1P09493 AC005828.7-201ENST00000607331 556 ntBASIC6□□□□□ -1.45
TPM1P09493 AL139407.1-201ENST00000613826 1175 ntBASIC6□□□□□ -1.45
TPM1P09493 AC073869.8-201ENST00000641806 335 ntBASIC6□□□□□ -1.45
TPM1P09493 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 OSBPL9P1-201ENST00000604744 1469 ntBASIC6□□□□□ -1.45
TPM1P09493 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
TPM1P09493 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
TPM1P09493 ZNF652P1-201ENST00000442420 1309 ntBASIC5.99□□□□□ -1.45
TPM1P09493 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.99□□□□□ -1.45
TPM1P09493 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.99□□□□□ -1.45
TPM1P09493 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.99□□□□□ -1.45
TPM1P09493 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
TPM1P09493 AL353796.1-201ENST00000561542 3241 ntBASIC5.99□□□□□ -1.45
TPM1P09493 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.99□□□□□ -1.45
TPM1P09493 RNU1-19P-201ENST00000363306 165 ntBASIC5.99□□□□□ -1.45
TPM1P09493 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
TPM1P09493 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.99□□□□□ -1.45
TPM1P09493 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 FTLP19-201ENST00000433300 394 ntBASIC5.99□□□□□ -1.45
TPM1P09493 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.99□□□□□ -1.45
TPM1P09493 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.99□□□□□ -1.45
TPM1P09493 AC006335.2-201ENST00000437993 330 ntBASIC5.99□□□□□ -1.45
TPM1P09493 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.99□□□□□ -1.45
TPM1P09493 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.99□□□□□ -1.45
TPM1P09493 KF459542.1-201ENST00000450908 553 ntBASIC5.99□□□□□ -1.45
TPM1P09493 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.99□□□□□ -1.45
TPM1P09493 AC068228.1-201ENST00000461723 211 ntBASIC5.99□□□□□ -1.45
TPM1P09493 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.99□□□□□ -1.45
TPM1P09493 RN7SL583P-201ENST00000475692 287 ntBASIC5.99□□□□□ -1.45
TPM1P09493 RPS3AP15-201ENST00000483874 781 ntBASIC5.99□□□□□ -1.45
TPM1P09493 RPS24P16-201ENST00000497294 392 ntBASIC5.99□□□□□ -1.45
TPM1P09493 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.99□□□□□ -1.45
TPM1P09493 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.99□□□□□ -1.45
TPM1P09493 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.99□□□□□ -1.45
TPM1P09493 AC092709.1-201ENST00000521355 1045 ntBASIC5.99□□□□□ -1.45
TPM1P09493 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TPM1P09493 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 AC006349.1-201ENST00000555526 235 ntBASIC5.99□□□□□ -1.45
TPM1P09493 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.99□□□□□ -1.45
TPM1P09493 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.99□□□□□ -1.45
TPM1P09493 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.99□□□□□ -1.45
TPM1P09493 AC011500.1-201ENST00000601963 469 ntBASIC5.99□□□□□ -1.45
TPM1P09493 AC009237.13-201ENST00000603193 276 ntBASIC5.99□□□□□ -1.45
TPM1P09493 AP001437.1-201ENST00000608783 456 ntBASIC5.99□□□□□ -1.45
TPM1P09493 AC005899.6-201ENST00000620729 297 ntBASIC5.99□□□□□ -1.45
TPM1P09493 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TPM1P09493 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.99□□□□□ -1.45
TPM1P09493 AC000374.1-201ENST00000434698 1745 ntBASIC5.99□□□□□ -1.45
TPM1P09493 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TPM1P09493 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TPM1P09493 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TPM1P09493 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TPM1P09493 AC007996.1-201ENST00000620414 2821 ntBASIC5.98□□□□□ -1.45
TPM1P09493 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.98□□□□□ -1.45
TPM1P09493 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
TPM1P09493 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TPM1P09493 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TPM1P09493 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
TPM1P09493 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.98□□□□□ -1.45
TPM1P09493 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.98□□□□□ -1.45
TPM1P09493 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.98□□□□□ -1.45
TPM1P09493 AL034549.2-201ENST00000618285 3373 ntBASIC5.98□□□□□ -1.45
TPM1P09493 AC003973.3-201ENST00000624863 2822 ntBASIC5.98□□□□□ -1.45
TPM1P09493 COX6B1P3-201ENST00000312310 260 ntBASIC5.98□□□□□ -1.45
TPM1P09493 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TPM1P09493 RN7SKP86-201ENST00000410454 332 ntBASIC5.98□□□□□ -1.45
TPM1P09493 AC007161.1-204ENST00000423039 460 ntBASIC5.98□□□□□ -1.45
TPM1P09493 AKR1B10P1-201ENST00000425765 942 ntBASIC5.98□□□□□ -1.45
TPM1P09493 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TPM1P09493 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.98□□□□□ -1.45
TPM1P09493 GTF3AP5-201ENST00000442645 697 ntBASIC5.98□□□□□ -1.45
TPM1P09493 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.98□□□□□ -1.45
TPM1P09493 CST12P-201ENST00000457644 362 ntBASIC5.98□□□□□ -1.45
TPM1P09493 RPSAP37-201ENST00000470913 821 ntBASIC5.98□□□□□ -1.45
TPM1P09493 AC022133.1-201ENST00000490961 571 ntBASIC5.98□□□□□ -1.45
TPM1P09493 RN7SL568P-201ENST00000493069 298 ntBASIC5.98□□□□□ -1.45
TPM1P09493 AC106822.1-201ENST00000502647 526 ntBASIC5.98□□□□□ -1.45
TPM1P09493 NENFP3-201ENST00000503735 313 ntBASIC5.98□□□□□ -1.45
TPM1P09493 AC091874.2-201ENST00000505889 720 ntBASIC5.98□□□□□ -1.45
TPM1P09493 EIF3KP3-201ENST00000514461 639 ntBASIC5.98□□□□□ -1.45
TPM1P09493 MRPS5P3-201ENST00000515577 166 ntBASIC5.98□□□□□ -1.45
TPM1P09493 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.98□□□□□ -1.45
TPM1P09493 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.98□□□□□ -1.45
TPM1P09493 SETP1-201ENST00000556014 845 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms