Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 HTR1DP1-201ENST00000616500 888 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 CR392039.4-201ENST00000624968 501 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.27□□□□□ -1.25
HMGB1P09429 AC006042.3-201ENST00000454684 1469 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGB1P09429 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
HMGB1P09429 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
HMGB1P09429 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.27□□□□□ -1.25
HMGB1P09429 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC7.27□□□□□ -1.25
HMGB1P09429 MTND4P31-201ENST00000425607 1343 ntBASIC7.27□□□□□ -1.25
HMGB1P09429 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
HMGB1P09429 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGB1P09429 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC7.26□□□□□ -1.25
HMGB1P09429 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGB1P09429 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
HMGB1P09429 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
HMGB1P09429 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
HMGB1P09429 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.26□□□□□ -1.25
HMGB1P09429 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
HMGB1P09429 MIR188-201ENST00000385034 86 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.26□□□□□ -1.25
HMGB1P09429 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.26□□□□□ -1.25
HMGB1P09429 AL390879.1-201ENST00000439143 386 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 RNFT1P2-201ENST00000443064 757 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 AC097359.1-201ENST00000447946 463 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 AL445687.2-201ENST00000458156 728 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 SLC25A51P1-201ENST00000468432 871 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 RPS27P20-201ENST00000492051 246 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
HMGB1P09429 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC7.26□□□□□ -1.25
HMGB1P09429 AC010285.3-201ENST00000511668 676 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGB1P09429 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC7.26□□□□□ -1.25
HMGB1P09429 VTA1P2-201ENST00000520205 911 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 AP001000.1-201ENST00000526843 742 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.26□□□□□ -1.25
HMGB1P09429 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC7.26□□□□□ -1.25
HMGB1P09429 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HMGB1P09429 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC7.26□□□□□ -1.25
HMGB1P09429 ARGFXP2-201ENST00000579304 949 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 GLYATL1P2-202ENST00000588046 902 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGB1P09429 AC079880.2-201ENST00000603790 1213 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 AC022106.1-201ENST00000612834 766 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 RN7SL261P-201ENST00000613441 282 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.26□□□□□ -1.25
HMGB1P09429 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HMGB1P09429 MTND5P11-201ENST00000511037 1812 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HMGB1P09429 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HMGB1P09429 CYP1D1P-201ENST00000416662 1433 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HMGB1P09429 AL445437.1-201ENST00000623157 3087 ntBASIC7.26□□□□□ -1.25
HMGB1P09429 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.25□□□□□ -1.25
HMGB1P09429 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.25□□□□□ -1.25
HMGB1P09429 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
HMGB1P09429 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.25□□□□□ -1.25
HMGB1P09429 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.25□□□□□ -1.25
HMGB1P09429 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.25□□□□□ -1.25
HMGB1P09429 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HMGB1P09429 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HMGB1P09429 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HMGB1P09429 AC024587.1-201ENST00000505925 2157 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.25□□□□□ -1.25
HMGB1P09429 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HMGB1P09429 RNU1-59P-201ENST00000364829 162 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
HMGB1P09429 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.25□□□□□ -1.25
HMGB1P09429 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
HMGB1P09429 RNU6-98P-201ENST00000384173 107 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 RPL31P52-201ENST00000407532 367 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.25□□□□□ -1.25
HMGB1P09429 AP000357.1-201ENST00000409926 1165 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 TCEA1P4-201ENST00000415066 844 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.25□□□□□ -1.25
HMGB1P09429 PTCD2P2-201ENST00000415579 1095 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.25□□□□□ -1.25
HMGB1P09429 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HMGB1P09429 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC7.25□□□□□ -1.25
HMGB1P09429 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.25□□□□□ -1.25
HMGB1P09429 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC7.25□□□□□ -1.25
HMGB1P09429 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
HMGB1P09429 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.25□□□□□ -1.25
HMGB1P09429 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC7.25□□□□□ -1.25
HMGB1P09429 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.25□□□□□ -1.25
HMGB1P09429 CYCSP42-201ENST00000450823 238 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.25□□□□□ -1.25
HMGB1P09429 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.25□□□□□ -1.25
HMGB1P09429 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.25□□□□□ -1.25
HMGB1P09429 AC106822.1-201ENST00000502647 526 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.25□□□□□ -1.25
HMGB1P09429 ZNF519P4-201ENST00000514008 125 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 IGKV2-36-201ENST00000519999 223 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 TPM3P3-201ENST00000521343 354 ntBASIC7.25□□□□□ -1.25
HMGB1P09429 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.25□□□□□ -1.25
HMGB1P09429 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC7.25□□□□□ -1.25
HMGB1P09429 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HMGB1P09429 AC063949.1-201ENST00000552900 865 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms