Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-DOAP06340 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-DOAP06340 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-DOAP06340 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-DOAP06340 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-DOAP06340 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 AL049634.1-201ENST00000453770 1720 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-DOAP06340 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-DOAP06340 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-DOAP06340 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-DOAP06340 OR9K1P-201ENST00000326513 941 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AF228730.1-201ENST00000397972 663 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 AL589655.1-201ENST00000405398 482 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 PTGES3P2-201ENST00000407942 482 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 BMS1P13-201ENST00000417301 885 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 CRIP1P1-201ENST00000427567 185 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 RPS3AP38-201ENST00000435889 763 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AL390879.1-201ENST00000439143 386 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 VDAC2P4-201ENST00000452925 711 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AL139824.2-201ENST00000458731 1095 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-DOAP06340 RPS3AP6-201ENST00000484430 795 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 AC105233.1-201ENST00000498840 781 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 RNA5SP34-201ENST00000516887 130 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 AC104997.1-201ENST00000519761 717 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 CIR1P1-201ENST00000524055 1133 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AC051619.2-201ENST00000559063 397 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 SUGT1P3-202ENST00000604259 383 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 AC013244.3-201ENST00000605614 388 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 NANOGP3-201ENST00000605855 286 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AC132068.1-201ENST00000623805 459 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 MAPK10-261ENST00000641050 3109 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-DOAP06340 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-DOAP06340 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-DOAP06340 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HLA-DOAP06340 AC099654.3-201ENST00000447087 1546 ntBASIC6.7□□□□□ -1.34
HLA-DOAP06340 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
HLA-DOAP06340 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 AC239868.2-201ENST00000564237 4527 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 HSPD1P8-201ENST00000400121 1658 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 AC120036.2-201ENST00000509729 1474 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 RNA5SP234-201ENST00000363916 119 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HLA-DOAP06340 AC009804.1-201ENST00000400949 179 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 RPL23AP17-201ENST00000401064 499 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 SNORA11B-201ENST00000408175 129 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 USP12PY-201ENST00000427677 1064 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 BRWD1P3-201ENST00000428816 390 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 LYPLA1P1-201ENST00000434514 622 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 LDHAP2-201ENST00000437325 985 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 AC019185.1-201ENST00000442718 389 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 SLC25A51P1-201ENST00000468432 871 ntBASIC6.69□□□□□ -1.34
HLA-DOAP06340 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.69□□□□□ -1.34
HLA-DOAP06340 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms