Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC019226.1-201ENST00000625666 515 ntBASIC6.06□□□□□ -1.44
CNOT4O95628 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.06□□□□□ -1.44
CNOT4O95628 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.06□□□□□ -1.44
CNOT4O95628 AP000547.3-204ENST00000588548 2523 ntBASIC6.06□□□□□ -1.44
CNOT4O95628 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.06□□□□□ -1.44
CNOT4O95628 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.06□□□□□ -1.44
CNOT4O95628 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNOT4O95628 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CNOT4O95628 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.06□□□□□ -1.44
CNOT4O95628 AL121950.1-201ENST00000624993 2077 ntBASIC6.06□□□□□ -1.44
CNOT4O95628 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CNOT4O95628 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.06□□□□□ -1.44
CNOT4O95628 AC027514.1-201ENST00000588561 1603 ntBASIC6.06□□□□□ -1.44
CNOT4O95628 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CNOT4O95628 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNOT4O95628 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CNOT4O95628 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNOT4O95628 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CNOT4O95628 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CNOT4O95628 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CNOT4O95628 MT-RNR2-201ENST00000387347 1559 ntBASIC6.06□□□□□ -1.44
CNOT4O95628 AC095038.1-201ENST00000429248 1591 ntBASIC6.06□□□□□ -1.44
CNOT4O95628 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CNOT4O95628 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.05□□□□□ -1.44
CNOT4O95628 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.05□□□□□ -1.44
CNOT4O95628 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.05□□□□□ -1.44
CNOT4O95628 DLEU2L-201ENST00000371086 3555 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.05□□□□□ -1.44
CNOT4O95628 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.05□□□□□ -1.44
CNOT4O95628 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 RNU1-146P-201ENST00000364015 165 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 RNU4-51P-201ENST00000364206 140 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 RN7SKP191-201ENST00000364713 306 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 RNU6-1005P-201ENST00000384519 107 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AC026310.1-201ENST00000396004 378 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.05□□□□□ -1.44
CNOT4O95628 AC002524.1-201ENST00000411687 547 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.05□□□□□ -1.44
CNOT4O95628 RPL18AP14-201ENST00000417685 526 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AC008753.1-201ENST00000423096 284 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 GAPDHP57-201ENST00000424400 585 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AC022022.1-201ENST00000430304 178 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.05□□□□□ -1.44
CNOT4O95628 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.05□□□□□ -1.44
CNOT4O95628 AC083855.1-201ENST00000440041 258 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AC023512.1-201ENST00000444513 499 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 HMGB3P6-201ENST00000444896 598 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 RPL34P26-201ENST00000445636 354 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AC234781.3-201ENST00000452540 973 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 MRPL42P4-201ENST00000453267 443 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.05□□□□□ -1.44
CNOT4O95628 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 AC026254.2-201ENST00000475295 371 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 RPS27AP16-201ENST00000492222 470 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.05□□□□□ -1.44
CNOT4O95628 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 RNU6-232P-201ENST00000517144 64 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AC087752.2-201ENST00000521219 281 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.05□□□□□ -1.44
CNOT4O95628 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 MTND4LP18-201ENST00000526864 291 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AP003033.2-201ENST00000528901 805 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.05□□□□□ -1.44
CNOT4O95628 AGGF1P4-201ENST00000568249 801 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 MIR4789-201ENST00000577469 82 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC6.05□□□□□ -1.44
CNOT4O95628 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.05□□□□□ -1.44
CNOT4O95628 DUXAP11-201ENST00000603858 526 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AC020765.1-201ENST00000604296 328 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.05□□□□□ -1.44
CNOT4O95628 AL163642.2-201ENST00000604722 1019 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AC016877.3-201ENST00000606778 504 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AP003392.5-201ENST00000607857 415 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6.05□□□□□ -1.44
CNOT4O95628 AL359091.2-201ENST00000609303 556 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 MIR7109-201ENST00000613748 65 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.05□□□□□ -1.44
CNOT4O95628 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.05□□□□□ -1.44
CNOT4O95628 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 AC139713.2-210ENST00000641741 992 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 RAD17P2-201ENST00000451754 1977 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CNOT4O95628 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.05□□□□□ -1.44
CNOT4O95628 AC005832.2-201ENST00000538921 1430 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 AC003973.3-201ENST00000624863 2822 ntBASIC6.05□□□□□ -1.44
CNOT4O95628 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CNOT4O95628 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms