Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SUMO2P3-201ENST00000438311 288 ntBASIC5.26□□□□□ -1.57
HCN1O60741 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.26□□□□□ -1.57
HCN1O60741 CBX1P2-201ENST00000453841 458 ntBASIC5.26□□□□□ -1.57
HCN1O60741 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.26□□□□□ -1.57
HCN1O60741 AC104849.1-201ENST00000462623 405 ntBASIC5.26□□□□□ -1.57
HCN1O60741 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.26□□□□□ -1.57
HCN1O60741 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.26□□□□□ -1.57
HCN1O60741 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HCN1O60741 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.26□□□□□ -1.57
HCN1O60741 AC109481.1-201ENST00000509173 282 ntBASIC5.26□□□□□ -1.57
HCN1O60741 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.26□□□□□ -1.57
HCN1O60741 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.26□□□□□ -1.57
HCN1O60741 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.26□□□□□ -1.57
HCN1O60741 AC027544.3-201ENST00000535082 757 ntBASIC5.26□□□□□ -1.57
HCN1O60741 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.26□□□□□ -1.57
HCN1O60741 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.26□□□□□ -1.57
HCN1O60741 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.26□□□□□ -1.57
HCN1O60741 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.26□□□□□ -1.57
HCN1O60741 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.26□□□□□ -1.57
HCN1O60741 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.26□□□□□ -1.57
HCN1O60741 AC109309.2-201ENST00000612597 332 ntBASIC5.26□□□□□ -1.57
HCN1O60741 AL691477.1-201ENST00000624398 162 ntBASIC5.26□□□□□ -1.57
HCN1O60741 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HCN1O60741 AL049767.1-202ENST00000637826 242 ntBASIC5.26□□□□□ -1.57
HCN1O60741 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.26□□□□□ -1.57
HCN1O60741 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.26□□□□□ -1.57
HCN1O60741 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
HCN1O60741 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
HCN1O60741 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.26□□□□□ -1.57
HCN1O60741 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
HCN1O60741 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN1O60741 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HCN1O60741 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN1O60741 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
HCN1O60741 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HCN1O60741 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.25□□□□□ -1.57
HCN1O60741 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
HCN1O60741 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.25□□□□□ -1.57
HCN1O60741 AC092111.2-201ENST00000611627 1414 ntBASIC5.25□□□□□ -1.57
HCN1O60741 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 AC092376.2-201ENST00000622621 4116 ntBASIC5.25□□□□□ -1.57
HCN1O60741 MTCO1P11-201ENST00000429111 1528 ntBASIC5.25□□□□□ -1.57
HCN1O60741 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HCN1O60741 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 RNA5SP394-201ENST00000364216 119 ntBASIC5.25□□□□□ -1.57
HCN1O60741 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.25□□□□□ -1.57
HCN1O60741 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.25□□□□□ -1.57
HCN1O60741 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.25□□□□□ -1.57
HCN1O60741 Z84478.1-201ENST00000438230 1219 ntBASIC5.25□□□□□ -1.57
HCN1O60741 AP000281.1-201ENST00000444036 316 ntBASIC5.25□□□□□ -1.57
HCN1O60741 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.25□□□□□ -1.57
HCN1O60741 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.25□□□□□ -1.57
HCN1O60741 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
HCN1O60741 GAPDHP62-201ENST00000515313 990 ntBASIC5.25□□□□□ -1.57
HCN1O60741 RNU6-615P-201ENST00000516065 106 ntBASIC5.25□□□□□ -1.57
HCN1O60741 HMGB1P42-201ENST00000532126 553 ntBASIC5.25□□□□□ -1.57
HCN1O60741 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.25□□□□□ -1.57
HCN1O60741 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 AC008126.1-201ENST00000549019 480 ntBASIC5.25□□□□□ -1.57
HCN1O60741 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.25□□□□□ -1.57
HCN1O60741 MIR4505-201ENST00000582238 73 ntBASIC5.25□□□□□ -1.57
HCN1O60741 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.25□□□□□ -1.57
HCN1O60741 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.25□□□□□ -1.57
HCN1O60741 AC092944.2-201ENST00000605443 889 ntBASIC5.25□□□□□ -1.57
HCN1O60741 Z95327.3-201ENST00000610385 572 ntBASIC5.25□□□□□ -1.57
HCN1O60741 AC004477.3-201ENST00000614061 590 ntBASIC5.25□□□□□ -1.57
HCN1O60741 MIR6133-201ENST00000617057 108 ntBASIC5.25□□□□□ -1.57
HCN1O60741 AC015660.5-201ENST00000623238 564 ntBASIC5.25□□□□□ -1.57
HCN1O60741 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.25□□□□□ -1.57
HCN1O60741 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HCN1O60741 OR11H2-202ENST00000641517 1085 ntBASIC5.25□□□□□ -1.57
HCN1O60741 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN1O60741 OR9K1P-202ENST00000641111 3217 ntBASIC5.25□□□□□ -1.57
HCN1O60741 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
HCN1O60741 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
HCN1O60741 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.24□□□□□ -1.57
HCN1O60741 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
HCN1O60741 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HCN1O60741 AC006484.1-201ENST00000435086 1884 ntBASIC5.24□□□□□ -1.57
HCN1O60741 AC011933.2-201ENST00000578539 2790 ntBASIC5.24□□□□□ -1.57
HCN1O60741 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HCN1O60741 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
HCN1O60741 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
HCN1O60741 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
HCN1O60741 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.24□□□□□ -1.57
HCN1O60741 U3.7-201ENST00000363668 216 ntBASIC5.24□□□□□ -1.57
HCN1O60741 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms