Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 AL121594.2-201ENST00000541658 472 ntBASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 MIR3176-201ENST00000582210 90 ntBASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 AC006115.2-201ENST00000596823 202 ntBASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 MRE11P1-201ENST00000464884 2127 ntBASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
NPIPA2E9PIF3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 SRRM1P3-201ENST00000426911 2678 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AL034546.1-201ENST00000623740 3693 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 MFSD8-219ENST00000641228 2559 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 TCP11X1-202ENST00000622971 1372 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC083843.2-201ENST00000568248 6253 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AL359955.1-201ENST00000455242 3275 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 Y_RNA.62-201ENST00000362840 99 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 RNU1-146P-201ENST00000364015 165 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 RNA5SP132-201ENST00000364725 118 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 SNORA11B-201ENST00000408175 129 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC009506.2-201ENST00000420635 840 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC005297.1-201ENST00000444765 862 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC006539.1-201ENST00000481419 501 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 DUTP7-201ENST00000507982 486 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC021678.3-201ENST00000517893 476 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AP000859.1-201ENST00000525536 307 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC060766.1-201ENST00000590824 627 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC006272.2-201ENST00000594725 163 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC079395.2-201ENST00000610982 737 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AL353796.1-201ENST00000561542 3241 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 AC117409.1-201ENST00000470499 1310 ntBASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA2E9PIF3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 YES1P1-201ENST00000418510 1628 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 AC018809.2-201ENST00000602436 3823 ntBASIC5.19□□□□□ -1.58
NPIPA2E9PIF3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms