Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 OR13C1P-202ENST00000641378 2919 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRAV27A0A087WT01 AP001157.1-201ENST00000550837 2339 ntBASIC4.84□□□□□ -1.64
TRAV27A0A087WT01 ADAM5-202ENST00000399789 1942 ntBASIC4.84□□□□□ -1.64
TRAV27A0A087WT01 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AC090220.1-201ENST00000593078 1699 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 Z95331.1-201ENST00000623075 23112 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 RN7SKP292-201ENST00000365522 317 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AC007618.1-201ENST00000366455 732 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AC099535.1-201ENST00000408928 371 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 Z93019.1-201ENST00000416450 973 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 IPPKP1-201ENST00000422501 768 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 TNPO1P1-201ENST00000423641 1138 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 SETP9-201ENST00000423837 832 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AC124944.2-201ENST00000429866 1242 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 NDUFA5P5-201ENST00000468361 342 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 PFN1P8-201ENST00000497012 543 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AC016559.2-201ENST00000510759 359 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 EIF3KP3-201ENST00000514461 639 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 SNORD46.2-201ENST00000516021 102 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AC027369.5-201ENST00000533838 755 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AC010547.6-201ENST00000571789 193 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AC007683.2-201ENST00000624681 714 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 AC092376.2-201ENST00000622621 4116 ntBASIC4.83□□□□□ -1.64
TRAV27A0A087WT01 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AC026523.2-201ENST00000625039 7739 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 RNA5SP122-201ENST00000384457 108 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 BMS1P17-202ENST00000416720 316 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 BX119904.3-201ENST00000428194 957 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AC002504.1-201ENST00000438281 691 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 RPL36AP39-201ENST00000445859 318 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 PRPF38AP1-201ENST00000451976 933 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AC058823.1-201ENST00000485315 474 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AC022133.1-201ENST00000490961 571 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 RPS24P16-201ENST00000497294 392 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 PSMA2P2-201ENST00000504319 686 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 HMGB1P44-201ENST00000508597 572 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 RNA5SP230-201ENST00000517039 122 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AL359219.2-201ENST00000555184 348 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AC005726.4-201ENST00000582858 458 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 OR7A8P-201ENST00000595427 913 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 MIR6839-201ENST00000620425 113 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 CU639417.4-201ENST00000623928 207 ntBASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAV27A0A087WT01 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAV27A0A087WT01 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms