Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB1Q9Y5F3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.2□□□□□ -1.42
PCDHB1Q9Y5F3 AL359976.1-201ENST00000418655 3528 ntBASIC6.2□□□□□ -1.42
PCDHB1Q9Y5F3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.2□□□□□ -1.42
PCDHB1Q9Y5F3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB1Q9Y5F3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
PCDHB1Q9Y5F3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC027575.3-201ENST00000583058 2747 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC096921.2-201ENST00000561507 1916 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 DDX18P6-201ENST00000450119 1997 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 RPL5P19-201ENST00000404228 893 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 RNA5SP251-201ENST00000410614 137 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 RN7SKP121-201ENST00000410842 305 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 SLC20A1P1-201ENST00000413906 956 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AL592310.1-201ENST00000414330 671 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 PNRC2P1-201ENST00000423940 420 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC112492.2-201ENST00000432774 1030 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 SNRPFP2-201ENST00000440710 251 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC097463.1-201ENST00000447288 481 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 MTND1P31-201ENST00000449206 961 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 BOLA3P3-201ENST00000505182 232 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC025458.1-201ENST00000506046 166 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC147055.3-201ENST00000510547 851 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 MTCYBP19-201ENST00000517463 1124 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC036111.2-201ENST00000533247 901 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC018558.5-201ENST00000565840 952 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 MIR4701-201ENST00000583094 63 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC027229.1-201ENST00000583887 253 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC100767.2-201ENST00000604840 693 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC097065.2-201ENST00000608159 533 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC019131.2-201ENST00000609071 870 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC005899.7-201ENST00000618199 588 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC006963.1-201ENST00000624003 1052 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC003992.1-201ENST00000635364 557 ntBASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDHB1Q9Y5F3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 AL354854.1-201ENST00000455940 1363 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 TAS2R15P-201ENST00000390674 928 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 OR51B3P-201ENST00000412287 913 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 AC016769.2-201ENST00000414815 475 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 HIGD1AP15-201ENST00000416198 280 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 AC007562.1-201ENST00000421819 517 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 XKRYP1-201ENST00000423438 492 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 NANOGP5-201ENST00000424456 877 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 RPL12P12-201ENST00000424633 501 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 XKRYP2-201ENST00000432915 492 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 PPIAP10-201ENST00000438675 458 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 AC023274.2-201ENST00000445264 521 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 MTATP6P26-201ENST00000445926 662 ntBASIC6.18□□□□□ -1.42
PCDHB1Q9Y5F3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms