Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 AF230666.2-201ENST00000602328 725 ntBASIC6.82□□□□□ -1.32
SCN11AQ9UI33 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SCN11AQ9UI33 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 RN7SKP149-201ENST00000363008 344 ntBASIC6.81□□□□□ -1.32
SCN11AQ9UI33 AL035419.1-201ENST00000397037 564 ntBASIC6.81□□□□□ -1.32
SCN11AQ9UI33 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 AC099494.2-201ENST00000623371 978 ntBASIC6.81□□□□□ -1.32
SCN11AQ9UI33 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SCN11AQ9UI33 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 IRF5P1-201ENST00000504852 2164 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AL355488.2-201ENST00000609909 2850 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AC022893.2-201ENST00000564832 3296 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AC068138.1-201ENST00000412635 217 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 RPS3AP53-201ENST00000454716 778 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 GYG1P1-201ENST00000460864 698 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 BRD9P1-201ENST00000529855 560 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AC009027.1-201ENST00000604510 479 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AL022394.1-201ENST00000606979 292 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 RN7SKP185-201ENST00000362813 326 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 RNA5SP123-201ENST00000363244 119 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 COX6B1P1-201ENST00000415962 213 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AC124944.2-201ENST00000429866 1242 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 NOP56P2-201ENST00000447491 769 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AC079168.1-201ENST00000458741 345 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AC092905.1-201ENST00000467527 949 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AL512310.9-201ENST00000553311 948 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AP005131.7-201ENST00000610087 611 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AL353662.3-201ENST00000625131 237 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 AC009779.8-201ENST00000641684 4384 ntBASIC6.8□□□□□ -1.32
SCN11AQ9UI33 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 RNA5SP428-201ENST00000365129 132 ntBASIC6.79□□□□□ -1.32
SCN11AQ9UI33 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 HSPA8P15-201ENST00000401676 786 ntBASIC6.79□□□□□ -1.32
SCN11AQ9UI33 MIR1182-201ENST00000408363 97 ntBASIC6.79□□□□□ -1.32
SCN11AQ9UI33 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 AC011753.3-201ENST00000443436 406 ntBASIC6.79□□□□□ -1.32
SCN11AQ9UI33 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 NDUFA5P8-201ENST00000449019 346 ntBASIC6.79□□□□□ -1.32
SCN11AQ9UI33 AC090142.2-201ENST00000483263 416 ntBASIC6.79□□□□□ -1.32
SCN11AQ9UI33 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.79□□□□□ -1.32
SCN11AQ9UI33 RPS4XP20-201ENST00000505751 772 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms