Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 AC007342.5-201ENST00000571340 2142 ntBASIC5.67□□□□□ -1.5
SPASTQ9UBP0 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 AL355488.2-201ENST00000609909 2850 ntBASIC5.67□□□□□ -1.5
SPASTQ9UBP0 AC097063.1-201ENST00000426714 1797 ntBASIC5.67□□□□□ -1.5
SPASTQ9UBP0 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SPASTQ9UBP0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AL022311.1-201ENST00000623726 19416 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC232271.1-201ENST00000602455 2715 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 NLRP3P1-201ENST00000622303 1785 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AL391422.1-201ENST00000402155 436 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 NPM1P37-201ENST00000403105 874 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 SPRYD7P1-201ENST00000443861 570 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 RN7SL570P-201ENST00000484405 292 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 RPL38P3-201ENST00000484463 213 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 RPL32P33-201ENST00000487023 394 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 MORF4L2P1-201ENST00000503761 858 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC027308.1-201ENST00000517993 110 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 MRPS16P1-201ENST00000523462 412 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC244502.2-201ENST00000543361 851 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AL121839.1-201ENST00000556233 1185 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 MIR1273E-201ENST00000581165 102 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 SUMO2P15-201ENST00000604285 278 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 AC130304.1-201ENST00000622942 2385 ntBASIC5.66□□□□□ -1.5
SPASTQ9UBP0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SPASTQ9UBP0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
SPASTQ9UBP0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SPASTQ9UBP0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.65□□□□□ -1.5
SPASTQ9UBP0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SPASTQ9UBP0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SPASTQ9UBP0 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
SPASTQ9UBP0 AC005224.3-201ENST00000584683 2140 ntBASIC5.65□□□□□ -1.5
SPASTQ9UBP0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.65□□□□□ -1.5
SPASTQ9UBP0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.65□□□□□ -1.5
SPASTQ9UBP0 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SPASTQ9UBP0 GAPDHP24-201ENST00000328713 983 ntBASIC5.65□□□□□ -1.5
SPASTQ9UBP0 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.65□□□□□ -1.5
SPASTQ9UBP0 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.65□□□□□ -1.5
SPASTQ9UBP0 U3.23-201ENST00000391132 200 ntBASIC5.65□□□□□ -1.5
SPASTQ9UBP0 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.65□□□□□ -1.5
SPASTQ9UBP0 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.65□□□□□ -1.5
SPASTQ9UBP0 SNORA11B-201ENST00000408175 129 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms