Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC009237.13-201ENST00000603193 276 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC005229.3-201ENST00000603438 323 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 RPSAP73-201ENST00000614820 330 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC090510.2-201ENST00000617465 629 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC144833.1-201ENST00000567953 4089 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 U8.4-201ENST00000363626 134 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 RNA5SP514-201ENST00000363717 111 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 PPIAP9-201ENST00000403866 498 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 CRIP1P1-201ENST00000427567 185 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AL451063.1-201ENST00000450164 1133 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 RN7SL826P-201ENST00000479724 288 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC004815.1-201ENST00000484185 331 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 OR10G5P-201ENST00000532733 358 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC008536.1-201ENST00000602872 669 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC083837.1-201ENST00000565297 2994 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 AC100757.1-201ENST00000616872 1835 ntBASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.87□□□□□ -1.63
KIAA1549Q9HCM3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 RPL23P2-201ENST00000320371 421 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 RN7SKP17-201ENST00000411242 351 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 SRSF1P1-201ENST00000424058 520 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 EEF1B2P5-201ENST00000444820 548 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 AC092754.1-201ENST00000472975 479 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 CBX1P5-201ENST00000475330 559 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 RPSAP50-201ENST00000481955 852 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 IGLV2-28-201ENST00000520681 304 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 AC122688.1-201ENST00000541494 223 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 BNIP3P32-201ENST00000600015 554 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 AL049840.6-202ENST00000603373 279 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 AC018628.1-201ENST00000624147 3819 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 AC006600.2-201ENST00000624834 2506 ntBASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
KIAA1549Q9HCM3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 MIR223-201ENST00000385204 110 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 RNU1-149P-201ENST00000390870 161 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AL596266.1-201ENST00000448132 400 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 FAR2P1-206ENST00000449736 709 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC093763.2-201ENST00000505334 1223 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 HIGD1AP14-201ENST00000507617 282 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 IMPA1P1-201ENST00000510718 842 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC024940.3-201ENST00000538551 316 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 MIR3691-201ENST00000578066 90 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AP002884.5-201ENST00000595053 1132 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 AC008115.4-201ENST00000619780 775 ntBASIC4.85□□□□□ -1.63
KIAA1549Q9HCM3 CASC19-264ENST00000641912 1184 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms