Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RPSAP37-201ENST00000470913 821 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC022215.1-201ENST00000481770 362 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC009120.1-201ENST00000493458 473 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 ASNSP4-201ENST00000511103 447 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 RNU6-1334P-201ENST00000516032 105 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC130364.2-201ENST00000528639 604 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC006518.1-201ENST00000541449 943 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 MIR4311-201ENST00000580794 100 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC015802.2-201ENST00000589690 189 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC007423.1-201ENST00000605009 627 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 RN7SL544P-201ENST00000617232 284 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AP005431.1-201ENST00000618479 319 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 MIR6861-201ENST00000618657 64 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 RN7SL763P-201ENST00000620922 284 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC079097.1-201ENST00000512187 1399 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 AC068870.1-201ENST00000563737 2455 ntBASIC5.79□□□□□ -1.48
PCDH9Q9HC56 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDH9Q9HC56 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AC018809.2-201ENST00000602436 3823 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AL121839.2-201ENST00000565058 6943 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 MT-RNR1-201ENST00000389680 954 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 EEF1B2P8-201ENST00000414101 671 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 NENFP1-201ENST00000419476 466 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 RIMKLBP2-201ENST00000424737 654 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AC127526.2-201ENST00000426436 775 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AL022331.1-201ENST00000429025 477 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 HMGB3P24-201ENST00000433260 622 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AC073465.2-201ENST00000440938 498 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AL445665.1-202ENST00000452436 324 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 RNF19BPY-201ENST00000458209 1550 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 PSAT1P4-201ENST00000466500 526 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 RN7SL188P-201ENST00000469842 285 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 UBFD1P1-201ENST00000473259 814 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 IGLV3-24-201ENST00000517477 197 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 OR5AM1P-201ENST00000532136 1032 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AP004609.2-201ENST00000532177 190 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 HSPE1P2-201ENST00000554777 306 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AL731537.2-201ENST00000561565 951 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AC027243.2-201ENST00000602530 724 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AC005972.3-201ENST00000606304 481 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AC020763.5-201ENST00000623298 430 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 PWAR1-201ENST00000624188 2414 ntBASIC5.78□□□□□ -1.48
PCDH9Q9HC56 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDH9Q9HC56 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.48
PCDH9Q9HC56 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDH9Q9HC56 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms