Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 MIR4732-201ENST00000581873 76 ntBASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AC005244.1-201ENST00000582566 339 ntBASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AC107993.1-201ENST00000591343 684 ntBASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AC079791.1-201ENST00000605356 973 ntBASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AC018695.5-201ENST00000605872 315 ntBASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AC022919.1-201ENST00000624979 626 ntBASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 CLUHP10-201ENST00000631979 980 ntBASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AC217777.1-201ENST00000570034 1471 ntBASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AC019072.1-201ENST00000604535 1551 ntBASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 AF287957.1-201ENST00000607368 1595 ntBASIC5.55□□□□□ -1.52
VIPAS39Q9H9C1 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AL589994.1-201ENST00000404962 340 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 RNA5SP487-201ENST00000410186 122 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 MEAF6P1-201ENST00000416092 327 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC010086.1-201ENST00000437359 1052 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 MRPL35P2-201ENST00000448009 511 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 BX842559.2-201ENST00000451418 605 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 DNAJB5P1-201ENST00000454004 806 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 RPS17P15-201ENST00000475609 349 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC093827.1-201ENST00000480094 861 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 RPL5P22-201ENST00000480199 884 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 RN7SL267P-201ENST00000485107 261 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 RPL32P33-201ENST00000487023 394 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AP000769.2-201ENST00000602344 396 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC073389.3-201ENST00000609434 935 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 MIR6809-201ENST00000612189 116 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AL139407.1-201ENST00000613826 1175 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC025574.2-201ENST00000615621 514 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 MIR8069-1-201ENST00000616627 86 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AP005431.1-201ENST00000618479 319 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 MIR8069-2-201ENST00000621412 86 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC007204.1-201ENST00000621794 555 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AL136228.1-201ENST00000622221 319 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC083843.3-201ENST00000623679 2186 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 AC116158.1-201ENST00000560231 2129 ntBASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
VIPAS39Q9H9C1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 RNA5SP198-201ENST00000410376 127 ntBASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 RN7SKP125-201ENST00000410481 302 ntBASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 AKR1B10P1-201ENST00000425765 942 ntBASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 UBE2V2P1-201ENST00000434717 398 ntBASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.53□□□□□ -1.52
VIPAS39Q9H9C1 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms