Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 MIR7853-201ENST00000584820 132 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 MIR6768-201ENST00000610734 72 ntBASIC5.67□□□□□ -1.5
C9orf72Q96LT7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.67□□□□□ -1.5
C9orf72Q96LT7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 MTCO1P11-201ENST00000429111 1528 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 RNA5SP30-201ENST00000365552 115 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 PPIAP9-201ENST00000403866 498 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 SUMO2P3-201ENST00000438311 288 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 DEFB109A-201ENST00000482450 265 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 RPS26P24-201ENST00000497656 331 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 AC091912.1-201ENST00000511351 248 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 AC010547.6-201ENST00000571789 193 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 MIR4311-201ENST00000580794 100 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 AC015802.2-201ENST00000589690 189 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 FAM72A-208ENST00000607379 1139 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 AC026367.3-201ENST00000619032 590 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 MIR6886-201ENST00000619864 61 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 AC003973.3-201ENST00000624863 2822 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 LINC02019-201ENST00000608605 2060 ntBASIC5.66□□□□□ -1.5
C9orf72Q96LT7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf72Q96LT7 AC007842.1-201ENST00000597336 2039 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AC100757.1-201ENST00000616872 1835 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AC005522.1-201ENST00000395416 346 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 RN7SKP293-201ENST00000411389 296 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AC079355.1-201ENST00000421770 223 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AC127526.2-201ENST00000426436 775 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AP000281.1-201ENST00000444036 316 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 CBX1P2-201ENST00000453841 458 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AC130364.2-201ENST00000528639 604 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AC108738.1-201ENST00000603703 237 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AC109309.2-201ENST00000612597 332 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AC004477.3-201ENST00000614061 590 ntBASIC5.65□□□□□ -1.5
C9orf72Q96LT7 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.65□□□□□ -1.5
C9orf72Q96LT7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
C9orf72Q96LT7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
C9orf72Q96LT7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.65□□□□□ -1.51
C9orf72Q96LT7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
C9orf72Q96LT7 AL078621.3-201ENST00000623707 2042 ntBASIC5.65□□□□□ -1.51
C9orf72Q96LT7 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.65□□□□□ -1.51
C9orf72Q96LT7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
C9orf72Q96LT7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.65□□□□□ -1.51
C9orf72Q96LT7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 AC005005.4-201ENST00000623789 16698 ntBASIC5.64□□□□□ -1.51
C9orf72Q96LT7 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C9orf72Q96LT7 SNORD56.6-201ENST00000384569 71 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms