Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL137918.1-201ENST00000624542 1922 ntBASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CHAMP1Q96JM3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC140134.1-201ENST00000511830 3544 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 U3.10-201ENST00000364459 214 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 RNU6-906P-201ENST00000384700 70 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC119751.3-201ENST00000399720 670 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 RPL21P50-201ENST00000417698 477 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 OSTCP4-201ENST00000424397 449 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 ARF4P4-201ENST00000439608 520 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 SNRPFP2-201ENST00000440710 251 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 VN1R25P-201ENST00000443385 738 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 OR6K5P-201ENST00000447050 945 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 SETP20-201ENST00000457046 852 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 TPT1P1-201ENST00000458495 518 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 RN7SL643P-201ENST00000471845 291 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC022336.1-201ENST00000475510 337 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC005017.1-201ENST00000482002 490 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC010374.1-201ENST00000503762 1237 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 MRPS36P3-201ENST00000519284 130 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC025918.2-201ENST00000558683 763 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 NPM1P42-201ENST00000560329 862 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 ZNF92P3-201ENST00000596594 954 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC110760.3-201ENST00000598794 467 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 MTCO3P22-201ENST00000603219 784 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC012175.1-201ENST00000603755 531 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC141002.1-201ENST00000607025 279 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC245008.1-201ENST00000608123 476 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AL136097.3-201ENST00000611097 505 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC012676.3-201ENST00000614983 479 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AL035461.2-201ENST00000619201 524 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC004232.3-201ENST00000622977 525 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 MTCO1P11-201ENST00000429111 1528 ntBASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
CHAMP1Q96JM3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 AC110716.2-201ENST00000563865 3945 ntBASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 RARSP1-201ENST00000542842 1418 ntBASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 RPL11P4-201ENST00000332269 436 ntBASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 RNA5SP110-201ENST00000362638 115 ntBASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.03□□□□□ -1.28
CHAMP1Q96JM3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms