Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AC099670.2-201ENST00000435130 321 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 MIR4697-201ENST00000582977 78 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 AC093388.1-201ENST00000609166 430 ntBASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SHROOM3Q8TF72 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 RPL11P3-201ENST00000395256 523 ntBASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 FAR2P2-201ENST00000413041 594 ntBASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 RIMKLBP2-201ENST00000424737 654 ntBASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 FAR2P4-202ENST00000425399 584 ntBASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 FAR2P1-206ENST00000449736 709 ntBASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 RANP1-206ENST00000455094 651 ntBASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 RPS4XP1-201ENST00000482189 787 ntBASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 RN7SL547P-201ENST00000490793 290 ntBASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 PMS2P3-207ENST00000529061 717 ntBASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 AC078878.1-201ENST00000539832 958 ntBASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 RBM22P12-201ENST00000567098 1255 ntBASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 AC000068.2-201ENST00000608816 460 ntBASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SHROOM3Q8TF72 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 PPIAP9-201ENST00000403866 498 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AL133482.1-201ENST00000415988 498 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 VN1R54P-201ENST00000435210 1049 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 RN7SL583P-201ENST00000475692 287 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 RPL7AP6-201ENST00000477943 801 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AF230666.2-201ENST00000602328 725 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AC073869.8-201ENST00000641806 335 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AC007938.2-201ENST00000604666 2634 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 RNA5SP453-201ENST00000362503 119 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 MIR551A-201ENST00000385042 96 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 CNOT7P2-201ENST00000441051 832 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 STRADBP1-201ENST00000478954 1281 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AC122688.1-201ENST00000541494 223 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 AP001496.3-201ENST00000580230 913 ntBASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.6□□□□□ -1.51
SHROOM3Q8TF72 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms