Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC095038.2-201ENST00000621464 1070 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AL356317.1-201ENST00000396110 1436 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 MTCO1P4-201ENST00000520516 1409 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 MAPK10-344ENST00000641718 3746 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AL049634.1-201ENST00000453770 1720 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 RNU6-1257P-201ENST00000384625 110 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AC092967.1-201ENST00000449016 481 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 BUD31P2-201ENST00000449374 300 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 MTND2P6-201ENST00000455337 1030 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 RN7SL222P-201ENST00000476452 299 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AC135999.1-201ENST00000478962 479 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AC022215.1-201ENST00000481770 362 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 MIR4330-201ENST00000579077 105 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 uc_338.18-201ENST00000615451 175 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 MIR1264-201ENST00000616374 69 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AP000346.3-201ENST00000622821 210 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AC034229.6-201ENST00000623704 224 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AC007938.2-201ENST00000604666 2634 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AC025470.1-201ENST00000510053 2032 ntBASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.18□□□□□ -1.26
SMC1BQ8NDV3 TMEM161BP1-201ENST00000457388 1457 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AL596244.1-201ENST00000567068 3779 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 CDY11P-201ENST00000447168 1651 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 MTND4LP17-201ENST00000414607 293 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 METTL15P3-201ENST00000415522 1221 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 PSMD10P3-201ENST00000437000 448 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC005297.1-201ENST00000444765 862 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 GAPDHP23-201ENST00000444823 993 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC016027.4-201ENST00000450866 277 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC104849.1-201ENST00000462623 405 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC068522.1-201ENST00000482895 345 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 EIF1P7-201ENST00000487533 337 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC106800.2-201ENST00000514009 1103 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC016550.3-201ENST00000515706 767 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 HMGB1P42-201ENST00000532126 553 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 MTND1P24-201ENST00000552175 861 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 FXNP1-201ENST00000555153 337 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 MIR4301-201ENST00000577203 66 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC027334.1-201ENST00000603257 310 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC010245.2-201ENST00000606908 1167 ntBASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC7.17□□□□□ -1.26
SMC1BQ8NDV3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms