Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 MTCO2P22-201ENST00000603246 681 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 BUB1P1-201ENST00000603541 607 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AL450489.1-201ENST00000612071 468 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 MIR6085-201ENST00000618314 110 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 SAMMSON-214ENST00000641395 1264 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 SGO1P1-201ENST00000603525 1447 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AC090181.3-201ENST00000624777 1514 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 CDY11P-201ENST00000447168 1651 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 CASC19-228ENST00000641414 1684 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 CUBNP3-201ENST00000457461 1784 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AP000547.3-204ENST00000588548 2523 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 AL157831.2-201ENST00000564681 3095 ntBASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRIM48Q8IWZ4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC132825.1-201ENST00000463573 2247 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 MTND4P26-201ENST00000415971 1359 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 FAM133CP-201ENST00000332869 704 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 RNU1-46P-201ENST00000384425 164 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 RNU6-192P-201ENST00000391253 100 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AL121978.1-201ENST00000402778 359 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 RPL5P20-201ENST00000403848 896 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 MTCO1P21-201ENST00000416634 589 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC003989.1-201ENST00000434569 565 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 MTCO2P16-201ENST00000436962 677 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC007383.1-201ENST00000445875 636 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC097359.1-201ENST00000447946 463 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 RPL23AP44-201ENST00000482216 473 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 RN7SL561P-201ENST00000488553 281 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 RN7SL568P-201ENST00000493069 298 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC093816.1-201ENST00000515076 913 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 RN7SKP141-201ENST00000516167 338 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 SCARNA5-201ENST00000516201 276 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 RN7SKP183-201ENST00000517169 324 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AL121839.1-201ENST00000556233 1185 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC022069.1-201ENST00000582910 658 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AP001269.3-201ENST00000588718 329 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC063977.7-201ENST00000594454 337 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AL078623.1-201ENST00000602702 907 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 WBP1LP12-201ENST00000604449 331 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC004492.1-201ENST00000607036 742 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AL354976.1-201ENST00000613843 387 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AL158163.2-201ENST00000619110 700 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 OR1N1-202ENST00000619659 939 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC114546.4-201ENST00000624413 369 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 AC084035.1-201ENST00000634543 607 ntBASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM48Q8IWZ4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms