Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL358876.1-201ENST00000453364 1075 ntBASIC4.93□□□□□ -1.62
LRRC28Q86X40 NXT1P1-201ENST00000458481 316 ntBASIC4.93□□□□□ -1.62
LRRC28Q86X40 AC007998.1-201ENST00000474156 672 ntBASIC4.93□□□□□ -1.62
LRRC28Q86X40 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 AP000797.2-201ENST00000475768 606 ntBASIC4.93□□□□□ -1.62
LRRC28Q86X40 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LRRC28Q86X40 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 AC106872.5-201ENST00000508856 1416 ntBASIC4.93□□□□□ -1.62
LRRC28Q86X40 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 AC022826.1-201ENST00000519383 805 ntBASIC4.93□□□□□ -1.62
LRRC28Q86X40 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 MIR3614-201ENST00000581261 86 ntBASIC4.93□□□□□ -1.62
LRRC28Q86X40 AC027243.2-201ENST00000602530 724 ntBASIC4.93□□□□□ -1.62
LRRC28Q86X40 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 AC019072.1-201ENST00000604535 1551 ntBASIC4.93□□□□□ -1.62
LRRC28Q86X40 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 AC091305.2-201ENST00000624049 1576 ntBASIC4.93□□□□□ -1.62
LRRC28Q86X40 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRC28Q86X40 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.93□□□□□ -1.62
LRRC28Q86X40 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRC28Q86X40 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRC28Q86X40 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRRC28Q86X40 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LRRC28Q86X40 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 AL360270.2-201ENST00000562952 5985 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LRRC28Q86X40 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LRRC28Q86X40 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LRRC28Q86X40 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 RNA5SP284-201ENST00000384547 118 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 MIR130A-201ENST00000385274 89 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC002524.1-201ENST00000411687 547 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 DEFA9P-201ENST00000433042 285 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC012512.1-201ENST00000446594 718 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 RPL31P15-201ENST00000449770 338 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 RPS4XP12-201ENST00000461747 709 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 RPS23P2-201ENST00000463671 415 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LRRC28Q86X40 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC016559.2-201ENST00000510759 359 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 HMGN2P36-201ENST00000529541 409 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC091078.2-201ENST00000557145 559 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC040958.1-201ENST00000561102 201 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC008521.2-201ENST00000591021 259 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.92□□□□□ -1.62
LRRC28Q86X40 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LRRC28Q86X40 AL078621.3-201ENST00000623707 2042 ntBASIC4.92□□□□□ -1.62
LRRC28Q86X40 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC28Q86X40 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC28Q86X40 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC28Q86X40 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC28Q86X40 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 RNA5SP435-201ENST00000364044 108 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 RNA5SP122-201ENST00000384457 108 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 AL031985.1-201ENST00000392713 418 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC28Q86X40 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 CDY17P-201ENST00000414121 1282 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 AK4P4-201ENST00000419465 646 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 RIMKLBP2-201ENST00000424737 654 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 AC104843.2-201ENST00000427666 297 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 MTND6P12-201ENST00000428247 522 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 HSPD1P12-201ENST00000429127 1069 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 RPL7AP49-201ENST00000429522 581 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 AL591438.1-201ENST00000433508 581 ntBASIC4.91□□□□□ -1.62
LRRC28Q86X40 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.91□□□□□ -1.62
LRRC28Q86X40 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms