Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS13CQ709C8 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 LPP-208ENST00000448637 5835 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 RNA5SP191-201ENST00000362585 102 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 AL359837.1-201ENST00000381357 287 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 RNA5SP171-201ENST00000391071 115 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 AC025750.1-201ENST00000399891 379 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 RN7SL188P-201ENST00000469842 285 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.23□□□□□ -1.73
VPS13CQ709C8 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC4.23□□□□□ -1.73
VPS13CQ709C8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS13CQ709C8 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS13CQ709C8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 IGBP1P3-201ENST00000447449 1000 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 OR52J1P-201ENST00000450596 932 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 AC011276.1-201ENST00000469688 323 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 AP000889.1-201ENST00000530968 660 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 MEGF10-203ENST00000503335 7571 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS13CQ709C8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 LRRC37A17P-201ENST00000570311 4693 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS13CQ709C8 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS13CQ709C8 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS13CQ709C8 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 UGT2B24P-201ENST00000514441 1597 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 RPL23AP17-201ENST00000401064 499 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 AC010733.1-201ENST00000451515 401 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 AC006130.2-201ENST00000586202 326 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 AC130448.2-201ENST00000624082 374 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 AC008785.1-201ENST00000624475 456 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS13CQ709C8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 CC2D2A-202ENST00000424120 5249 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS13CQ709C8 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS13CQ709C8 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 RNU4-25P-201ENST00000410569 230 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 GPS2P1-201ENST00000411761 986 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 MRPS21P2-201ENST00000424704 264 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 RPL12P17-201ENST00000432393 498 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 KRT8P51-201ENST00000438938 274 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 AL354714.3-201ENST00000447284 493 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 snoU13.22-201ENST00000459428 104 ntBASIC4.22□□□□□ -1.73
VPS13CQ709C8 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS13CQ709C8 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
VPS13CQ709C8 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC4.21□□□□□ -1.73
VPS13CQ709C8 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
VPS13CQ709C8 SAMMSON-226ENST00000642089 1582 ntBASIC4.21□□□□□ -1.73
VPS13CQ709C8 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.21□□□□□ -1.73
VPS13CQ709C8 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.21□□□□□ -1.73
VPS13CQ709C8 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
VPS13CQ709C8 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
VPS13CQ709C8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS13CQ709C8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS13CQ709C8 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
VPS13CQ709C8 AC119674.1-213ENST00000641177 1386 ntBASIC4.21□□□□□ -1.74
VPS13CQ709C8 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS13CQ709C8 AC108751.5-201ENST00000492880 1336 ntBASIC4.21□□□□□ -1.74
VPS13CQ709C8 AC100757.1-201ENST00000616872 1835 ntBASIC4.21□□□□□ -1.74
VPS13CQ709C8 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS13CQ709C8 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS13CQ709C8 Z97832.1-201ENST00000402490 328 ntBASIC4.21□□□□□ -1.74
VPS13CQ709C8 AP002530.1-201ENST00000405705 684 ntBASIC4.21□□□□□ -1.74
VPS13CQ709C8 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.21□□□□□ -1.74
VPS13CQ709C8 PPIAP21-201ENST00000464473 501 ntBASIC4.21□□□□□ -1.74
VPS13CQ709C8 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS13CQ709C8 AC053481.3-201ENST00000577881 843 ntBASIC4.21□□□□□ -1.74
VPS13CQ709C8 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS13CQ709C8 AC125494.2-201ENST00000602431 657 ntBASIC4.21□□□□□ -1.74
VPS13CQ709C8 AL034374.2-201ENST00000605281 548 ntBASIC4.21□□□□□ -1.74
VPS13CQ709C8 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS13CQ709C8 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS13CQ709C8 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
VPS13CQ709C8 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
VPS13CQ709C8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS13CQ709C8 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms