Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AP000859.1-201ENST00000525536 307 ntBASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 AP003396.4-201ENST00000527574 265 ntBASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 AC092868.3-201ENST00000560515 784 ntBASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 MIR4271-201ENST00000582451 67 ntBASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 AL133481.2-203ENST00000607558 139 ntBASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 AC073592.6-201ENST00000624271 415 ntBASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 AC019080.5-201ENST00000624891 757 ntBASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 FBXL21-201ENST00000297158 1305 ntBASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NHLRC1Q6VVB1 MFSD8-219ENST00000641228 2559 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 RBPJP2-201ENST00000618187 1444 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 MTND3P20-201ENST00000407663 186 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 MIR1203-201ENST00000408812 85 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 RPL23AP4-201ENST00000427757 463 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 MTND2P40-201ENST00000436718 841 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC023141.8-201ENST00000442554 208 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 MTND3P4-201ENST00000453537 303 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AP002884.1-201ENST00000479691 655 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC139365.2-201ENST00000517972 253 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 TRIM77BP-201ENST00000524985 1119 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC096996.1-201ENST00000563813 325 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 MIMT1-201ENST00000597105 1050 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AL499605.1-201ENST00000604628 403 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC073111.2-201ENST00000605657 1075 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC009032.1-201ENST00000617574 431 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 AC117409.1-201ENST00000470499 1310 ntBASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
NHLRC1Q6VVB1 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 RNA5SP91-201ENST00000390902 119 ntBASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 MRPL53P1-201ENST00000414323 319 ntBASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 AC066692.1-201ENST00000421721 457 ntBASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 AL590623.1-201ENST00000427864 105 ntBASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 BX323845.3-201ENST00000428215 527 ntBASIC5.17□□□□□ -1.58
NHLRC1Q6VVB1 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms