Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRRK2Q5S007 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRRK2Q5S007 AOX3P-204ENST00000491025 2107 ntBASIC4.75□□□□□ -1.65
LRRK2Q5S007 RNU1-85P-201ENST00000364127 164 ntBASIC4.75□□□□□ -1.65
LRRK2Q5S007 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.75□□□□□ -1.65
LRRK2Q5S007 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
LRRK2Q5S007 AC025750.1-201ENST00000399891 379 ntBASIC4.75□□□□□ -1.65
LRRK2Q5S007 AL139039.2-201ENST00000407436 479 ntBASIC4.75□□□□□ -1.65
LRRK2Q5S007 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRRK2Q5S007 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRRK2Q5S007 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.75□□□□□ -1.65
LRRK2Q5S007 AL590399.4-201ENST00000436561 601 ntBASIC4.75□□□□□ -1.65
LRRK2Q5S007 RPL5P25-201ENST00000441148 775 ntBASIC4.75□□□□□ -1.65
LRRK2Q5S007 FTH1P8-201ENST00000498161 514 ntBASIC4.75□□□□□ -1.65
LRRK2Q5S007 SSX8-201ENST00000506270 579 ntBASIC4.75□□□□□ -1.65
LRRK2Q5S007 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
LRRK2Q5S007 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.75□□□□□ -1.65
LRRK2Q5S007 AC005377.1-201ENST00000605126 456 ntBASIC4.75□□□□□ -1.65
LRRK2Q5S007 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC4.75□□□□□ -1.65
LRRK2Q5S007 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRRK2Q5S007 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRRK2Q5S007 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRRK2Q5S007 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRRK2Q5S007 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC4.75□□□□□ -1.65
LRRK2Q5S007 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRRK2Q5S007 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 RPL10P10-201ENST00000403509 664 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 OR4K12P-201ENST00000406538 961 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 RN7SKP263-201ENST00000411194 309 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 ELOCP19-201ENST00000411919 318 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 AC025674.1-201ENST00000507074 324 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 AC074255.1-201ENST00000511259 501 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 RN7SKP288-201ENST00000516227 268 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 AC007494.1-201ENST00000562293 760 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 NANOGP3-201ENST00000605855 286 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 MLECP1-201ENST00000615893 709 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 AC099494.2-201ENST00000623371 978 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 AC009948.3-201ENST00000603415 1798 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 DMD-205ENST00000359836 7339 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 RPL23AP83-201ENST00000434984 473 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 RPS4XP20-201ENST00000505751 772 ntBASIC4.74□□□□□ -1.65
LRRK2Q5S007 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
LRRK2Q5S007 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRK2Q5S007 MFSD8-220ENST00000641243 1422 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRK2Q5S007 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 NXF4-202ENST00000416098 1465 ntBASIC4.73□□□□□ -1.65
LRRK2Q5S007 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LRRK2Q5S007 LDHAP2-201ENST00000437325 985 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms