Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 LDHAP1-201ENST00000509421 992 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.11□□□□□ -1.59
RFX4Q33E94 HMGN1P9-201ENST00000515212 298 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 RNU6-513P-201ENST00000516104 104 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 AC021678.3-201ENST00000517893 476 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 AC021733.2-201ENST00000518830 497 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.11□□□□□ -1.59
RFX4Q33E94 IGLV3-30-201ENST00000524362 298 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.11□□□□□ -1.59
RFX4Q33E94 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.11□□□□□ -1.59
RFX4Q33E94 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.11□□□□□ -1.59
RFX4Q33E94 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFX4Q33E94 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.11□□□□□ -1.59
RFX4Q33E94 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.11□□□□□ -1.59
RFX4Q33E94 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.11□□□□□ -1.59
RFX4Q33E94 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.11□□□□□ -1.59
RFX4Q33E94 AC091167.5-201ENST00000605689 894 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 AC048341.3-201ENST00000619323 491 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFX4Q33E94 AP001052.1-201ENST00000626421 99 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 AL138820.1-201ENST00000617901 5305 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFX4Q33E94 AC104966.1-201ENST00000467010 1464 ntBASIC5.11□□□□□ -1.59
RFX4Q33E94 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFX4Q33E94 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.11□□□□□ -1.59
RFX4Q33E94 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RFX4Q33E94 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RFX4Q33E94 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
RFX4Q33E94 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RFX4Q33E94 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.1□□□□□ -1.59
RFX4Q33E94 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX4Q33E94 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX4Q33E94 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX4Q33E94 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RFX4Q33E94 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX4Q33E94 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX4Q33E94 AL159987.1-201ENST00000347911 293 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RFX4Q33E94 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX4Q33E94 MT-RNR2-201ENST00000387347 1559 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.1□□□□□ -1.59
RFX4Q33E94 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 AL009179.1-201ENST00000406085 265 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 AC007738.1-201ENST00000413892 348 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 TCP1P3-201ENST00000414406 1498 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.1□□□□□ -1.59
RFX4Q33E94 CLNS1AP1-201ENST00000435954 682 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 SSXP3-201ENST00000442971 1300 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX4Q33E94 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX4Q33E94 CST12P-201ENST00000457644 362 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 RPS17P15-201ENST00000475609 349 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.1□□□□□ -1.59
RFX4Q33E94 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.1□□□□□ -1.59
RFX4Q33E94 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.1□□□□□ -1.59
RFX4Q33E94 SCARNA6.1-201ENST00000516989 238 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 RNA5SP340-201ENST00000517132 107 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 RN7SKP183-201ENST00000517169 324 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.1□□□□□ -1.59
RFX4Q33E94 AC130364.2-201ENST00000528639 604 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 HMGN2P36-201ENST00000529541 409 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 AC027026.1-201ENST00000532323 742 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 AC084121.1-201ENST00000533882 835 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.1□□□□□ -1.59
RFX4Q33E94 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RFX4Q33E94 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX4Q33E94 AL845552.1-201ENST00000556820 323 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.1□□□□□ -1.59
RFX4Q33E94 MIR3936-201ENST00000584304 110 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.1□□□□□ -1.59
RFX4Q33E94 AL139041.1-201ENST00000605480 610 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 RNU6-84P-201ENST00000607737 102 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.1□□□□□ -1.59
RFX4Q33E94 MIR6806-201ENST00000622141 64 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFX4Q33E94 PWAR1-201ENST00000624188 2414 ntBASIC5.1□□□□□ -1.59
RFX4Q33E94 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.1□□□□□ -1.59
RFX4Q33E94 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RFX4Q33E94 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RFX4Q33E94 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX4Q33E94 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX4Q33E94 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
RFX4Q33E94 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RFX4Q33E94 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFX4Q33E94 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX4Q33E94 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.1□□□□□ -1.59
RFX4Q33E94 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFX4Q33E94 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFX4Q33E94 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFX4Q33E94 PCAT14-202ENST00000627127 3935 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.09□□□□□ -1.59
RFX4Q33E94 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.09□□□□□ -1.59
RFX4Q33E94 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.09□□□□□ -1.59
RFX4Q33E94 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
RFX4Q33E94 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX4Q33E94 AC007996.1-201ENST00000620414 2821 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.59
RFX4Q33E94 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFX4Q33E94 COX6B1P3-201ENST00000312310 260 ntBASIC5.09□□□□□ -1.59
RFX4Q33E94 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms