Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 HSPE1P16-201ENST00000426640 348 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 SNX19-202ENST00000426933 888 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDH1Q08174 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AC112492.2-201ENST00000432774 1030 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH1Q08174 B3GNT2P1-201ENST00000434960 952 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 MTND1P28-201ENST00000435623 950 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AC015983.1-201ENST00000441577 373 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AC016908.1-201ENST00000442571 1219 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AC112653.1-201ENST00000443851 386 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AC114755.5-201ENST00000447760 831 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 CEACAMP5-201ENST00000448037 961 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 PCMTD1P3-201ENST00000451824 472 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDH1Q08174 RANP1-206ENST00000455094 651 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDH1Q08174 UBTFL6-201ENST00000477929 1024 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDH1Q08174 GAPDHP39-201ENST00000481866 979 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 RPS7P6-201ENST00000485777 579 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 RN7SL182P-201ENST00000496499 300 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 CDH12P2-201ENST00000504393 298 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AC097460.2-201ENST00000511857 741 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AC096661.1-201ENST00000515870 822 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDH1Q08174 NIFKP8-201ENST00000560500 874 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 MIR4470-201ENST00000583453 72 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.89□□□□□ -1.31
PCDH1Q08174 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AL078623.1-201ENST00000602702 907 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AC020765.1-201ENST00000604296 328 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AL022154.1-201ENST00000604698 785 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AC008945.2-201ENST00000606056 604 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AC006566.1-201ENST00000608943 513 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH1Q08174 BX005040.2-201ENST00000620504 370 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AC078909.2-201ENST00000620584 398 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
PCDH1Q08174 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC6.89□□□□□ -1.31
PCDH1Q08174 OR7E161P-202ENST00000641994 1033 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 AC010132.4-201ENST00000569883 1368 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 AL121949.2-201ENST00000403446 1548 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 NSRP1P1-201ENST00000444067 1693 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
PCDH1Q08174 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.89□□□□□ -1.31
PCDH1Q08174 AC092821.3-202ENST00000641304 2767 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 MAPK10-323ENST00000641493 3207 ntBASIC6.89□□□□□ -1.31
PCDH1Q08174 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
PCDH1Q08174 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.88□□□□□ -1.31
PCDH1Q08174 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
PCDH1Q08174 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH1Q08174 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH1Q08174 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
PCDH1Q08174 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH1Q08174 AL669831.5-218ENST00000591702 1873 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 MTND5P26-201ENST00000426018 1752 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDH1Q08174 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
PCDH1Q08174 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH1Q08174 AC104837.1-201ENST00000444644 1587 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDH1Q08174 TEX21P-201ENST00000447107 1476 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.88□□□□□ -1.31
PCDH1Q08174 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.88□□□□□ -1.31
PCDH1Q08174 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH1Q08174 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
PCDH1Q08174 RNU6-1017P-201ENST00000363613 106 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 RPL17P50-201ENST00000396131 546 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 RN7SKP236-201ENST00000410635 284 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 RN7SKP161-201ENST00000411110 305 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 PIGPP2-201ENST00000411569 458 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 AL773545.3-201ENST00000414297 706 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDH1Q08174 OR8F1P-201ENST00000425243 930 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 AC105052.2-201ENST00000434317 794 ntBASIC6.88□□□□□ -1.31
PCDH1Q08174 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.88□□□□□ -1.31
PCDH1Q08174 OR51P1P-201ENST00000447547 942 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms