Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
H3F3AP84243 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
H3F3AP84243 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
H3F3AP84243 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
H3F3AP84243 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
H3F3AP84243 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
H3F3AP84243 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
H3F3AP84243 RN7SKP185-201ENST00000362813 326 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 RN7SKP28-201ENST00000364770 305 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 RNU4-2-201ENST00000365668 141 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
H3F3AP84243 RPL7P56-201ENST00000429441 717 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 IGBP1P3-201ENST00000447449 1000 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 AL358876.1-201ENST00000453364 1075 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 SETP20-201ENST00000457046 852 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 AC023141.9-201ENST00000458734 412 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 PSAT1P4-201ENST00000466500 526 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.94□□□□□ -1.62
H3F3AP84243 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.94□□□□□ -1.62
H3F3AP84243 SUMO2P4-201ENST00000504193 276 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 AC021106.1-201ENST00000509020 1058 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.94□□□□□ -1.62
H3F3AP84243 IGKV3D-34-201ENST00000522638 302 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.94□□□□□ -1.62
H3F3AP84243 AC006363.1-201ENST00000603806 463 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 AC104695.2-201ENST00000605056 775 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.94□□□□□ -1.62
H3F3AP84243 AC132068.1-201ENST00000623805 459 ntBASIC4.94□□□□□ -1.62
H3F3AP84243 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.94□□□□□ -1.62
H3F3AP84243 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.94□□□□□ -1.62
H3F3AP84243 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
H3F3AP84243 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
H3F3AP84243 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.94□□□□□ -1.62
H3F3AP84243 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
H3F3AP84243 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
H3F3AP84243 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
H3F3AP84243 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
H3F3AP84243 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
H3F3AP84243 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
H3F3AP84243 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
H3F3AP84243 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.93□□□□□ -1.62
H3F3AP84243 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.93□□□□□ -1.62
H3F3AP84243 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 AC133552.1-201ENST00000569988 4007 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 AP001284.1-201ENST00000528393 2118 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
H3F3AP84243 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 HMGN2P27-201ENST00000427352 270 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 AC099670.2-201ENST00000435130 321 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 CYCSP51-201ENST00000443545 318 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 AC092106.1-201ENST00000444291 373 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.93□□□□□ -1.62
H3F3AP84243 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.93□□□□□ -1.62
H3F3AP84243 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.93□□□□□ -1.62
H3F3AP84243 RN7SL717P-201ENST00000478343 297 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.93□□□□□ -1.62
H3F3AP84243 RN7SL466P-201ENST00000497546 295 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 AC105420.1-201ENST00000504389 582 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 ASNSP4-201ENST00000511103 447 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.93□□□□□ -1.62
H3F3AP84243 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 AC027544.3-201ENST00000535082 757 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.93□□□□□ -1.62
H3F3AP84243 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.93□□□□□ -1.62
H3F3AP84243 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.93□□□□□ -1.62
H3F3AP84243 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.93□□□□□ -1.62
H3F3AP84243 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.93□□□□□ -1.62
H3F3AP84243 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.93□□□□□ -1.62
H3F3AP84243 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.93□□□□□ -1.62
H3F3AP84243 AL139124.1-201ENST00000609123 421 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 AL118522.2-201ENST00000616045 615 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.93□□□□□ -1.62
H3F3AP84243 MAPK10-338ENST00000641647 3362 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
H3F3AP84243 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
H3F3AP84243 AL359715.3-201ENST00000569267 2123 ntBASIC4.93□□□□□ -1.62
H3F3AP84243 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
H3F3AP84243 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.92□□□□□ -1.62
H3F3AP84243 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
H3F3AP84243 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
H3F3AP84243 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
H3F3AP84243 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
H3F3AP84243 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
H3F3AP84243 GVINP1-202ENST00000531871 7271 ntBASIC4.92□□□□□ -1.62
H3F3AP84243 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.92□□□□□ -1.62
H3F3AP84243 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
H3F3AP84243 RN7SKP124-201ENST00000364730 341 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms