Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL513327.3-201ENST00000602618 469 ntBASIC4.65□□□□□ -1.67
LMO4P61968 AL133481.2-203ENST00000607558 139 ntBASIC4.65□□□□□ -1.67
LMO4P61968 AC025574.2-201ENST00000615621 514 ntBASIC4.65□□□□□ -1.67
LMO4P61968 AL118522.2-201ENST00000616045 615 ntBASIC4.65□□□□□ -1.67
LMO4P61968 AC016769.4-201ENST00000616893 535 ntBASIC4.65□□□□□ -1.67
LMO4P61968 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LMO4P61968 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LMO4P61968 AC136428.4-201ENST00000634254 1155 ntBASIC4.65□□□□□ -1.67
LMO4P61968 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LMO4P61968 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LMO4P61968 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.65□□□□□ -1.67
LMO4P61968 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LMO4P61968 AL590763.1-201ENST00000398297 1545 ntBASIC4.65□□□□□ -1.67
LMO4P61968 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC4.65□□□□□ -1.67
LMO4P61968 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.65□□□□□ -1.67
LMO4P61968 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LMO4P61968 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LMO4P61968 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC4.65□□□□□ -1.67
LMO4P61968 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LMO4P61968 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.65□□□□□ -1.67
LMO4P61968 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
LMO4P61968 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.65□□□□□ -1.67
LMO4P61968 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC4.64□□□□□ -1.67
LMO4P61968 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMO4P61968 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMO4P61968 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LMO4P61968 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMO4P61968 AL591135.1-201ENST00000401578 5914 ntBASIC4.64□□□□□ -1.67
LMO4P61968 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMO4P61968 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMO4P61968 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
LMO4P61968 AL592429.1-201ENST00000403909 1473 ntBASIC4.64□□□□□ -1.67
LMO4P61968 AL161912.4-201ENST00000623889 2468 ntBASIC4.64□□□□□ -1.67
LMO4P61968 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMO4P61968 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMO4P61968 RN7SKP6-201ENST00000364795 319 ntBASIC4.64□□□□□ -1.67
LMO4P61968 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.64□□□□□ -1.67
LMO4P61968 RPL35AP24-201ENST00000413846 330 ntBASIC4.64□□□□□ -1.67
LMO4P61968 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.64□□□□□ -1.67
LMO4P61968 AC106901.1-201ENST00000425086 698 ntBASIC4.64□□□□□ -1.67
LMO4P61968 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.64□□□□□ -1.67
LMO4P61968 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC4.64□□□□□ -1.67
LMO4P61968 AL390879.1-201ENST00000439143 386 ntBASIC4.64□□□□□ -1.67
LMO4P61968 RSU1P1-201ENST00000453416 441 ntBASIC4.64□□□□□ -1.67
LMO4P61968 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.64□□□□□ -1.67
LMO4P61968 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC4.64□□□□□ -1.67
LMO4P61968 AC002075.1-201ENST00000457396 676 ntBASIC4.64□□□□□ -1.67
LMO4P61968 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMO4P61968 RPS7P6-201ENST00000485777 579 ntBASIC4.64□□□□□ -1.67
LMO4P61968 RN7SL30P-201ENST00000488416 306 ntBASIC4.64□□□□□ -1.67
LMO4P61968 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
LMO4P61968 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC4.64□□□□□ -1.67
LMO4P61968 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
LMO4P61968 AC147055.1-201ENST00000509261 750 ntBASIC4.64□□□□□ -1.67
LMO4P61968 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC4.64□□□□□ -1.67
LMO4P61968 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.64□□□□□ -1.67
LMO4P61968 AL049874.4-201ENST00000557593 255 ntBASIC4.64□□□□□ -1.67
LMO4P61968 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.64□□□□□ -1.67
LMO4P61968 AC011270.1-201ENST00000558606 583 ntBASIC4.64□□□□□ -1.67
LMO4P61968 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.64□□□□□ -1.67
LMO4P61968 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.64□□□□□ -1.67
LMO4P61968 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.64□□□□□ -1.67
LMO4P61968 CLIC4P2-201ENST00000601934 717 ntBASIC4.64□□□□□ -1.67
LMO4P61968 AP003117.1-201ENST00000602771 554 ntBASIC4.64□□□□□ -1.67
LMO4P61968 BNIP3P7-201ENST00000605641 516 ntBASIC4.64□□□□□ -1.67
LMO4P61968 AL512329.2-201ENST00000607350 548 ntBASIC4.64□□□□□ -1.67
LMO4P61968 RNU6-84P-201ENST00000607737 102 ntBASIC4.64□□□□□ -1.67
LMO4P61968 AC008115.4-201ENST00000619780 775 ntBASIC4.64□□□□□ -1.67
LMO4P61968 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.64□□□□□ -1.67
LMO4P61968 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.64□□□□□ -1.67
LMO4P61968 AC006927.4-201ENST00000639187 543 ntBASIC4.64□□□□□ -1.67
LMO4P61968 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.64□□□□□ -1.67
LMO4P61968 SAMMSON-209ENST00000641222 1100 ntBASIC4.64□□□□□ -1.67
LMO4P61968 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMO4P61968 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC4.64□□□□□ -1.67
LMO4P61968 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC4.64□□□□□ -1.67
LMO4P61968 PABPC1P6-201ENST00000445594 1829 ntBASIC4.64□□□□□ -1.67
LMO4P61968 AC073342.2-201ENST00000595842 1800 ntBASIC4.64□□□□□ -1.67
LMO4P61968 AC024341.1-201ENST00000526444 1552 ntBASIC4.64□□□□□ -1.67
LMO4P61968 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMO4P61968 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.64□□□□□ -1.67
LMO4P61968 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMO4P61968 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
LMO4P61968 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMO4P61968 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
LMO4P61968 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.64□□□□□ -1.67
LMO4P61968 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC4.64□□□□□ -1.67
LMO4P61968 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMO4P61968 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.63□□□□□ -1.67
LMO4P61968 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
LMO4P61968 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMO4P61968 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LMO4P61968 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.63□□□□□ -1.67
LMO4P61968 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LMO4P61968 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
LMO4P61968 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
LMO4P61968 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMO4P61968 RNA5SP183-201ENST00000362452 119 ntBASIC4.63□□□□□ -1.67
LMO4P61968 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.63□□□□□ -1.67
LMO4P61968 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms