Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL022393.1-201ENST00000625142 1677 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.94□□□□□ -1.78
CKS1BP61024 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 RBMY1HP-201ENST00000382759 1389 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 HSPA8P17-201ENST00000427029 1382 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 CASC19-255ENST00000641733 1385 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
CKS1BP61024 AC092681.1-201ENST00000297369 291 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CKS1BP61024 RNA5SP211-201ENST00000365516 117 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
CKS1BP61024 MIR138-2-201ENST00000384916 84 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 PSMA6P1-201ENST00000400275 741 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC3.94□□□□□ -1.78
CKS1BP61024 UBTFL2-201ENST00000411859 1191 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 Z93019.1-201ENST00000416450 973 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 RNGTTP1-201ENST00000420965 728 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 HSPD1P12-201ENST00000429127 1069 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 GAPDHP19-201ENST00000431768 1005 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC3.94□□□□□ -1.78
CKS1BP61024 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC3.94□□□□□ -1.78
CKS1BP61024 AC094019.1-201ENST00000434678 472 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.94□□□□□ -1.78
CKS1BP61024 AC023141.8-201ENST00000442554 208 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 TRIM60P16-201ENST00000444048 694 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC3.94□□□□□ -1.78
CKS1BP61024 SDC4P-201ENST00000453285 601 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 RPL10P17-201ENST00000453852 316 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 FRG2FP-204ENST00000453982 852 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC3.94□□□□□ -1.78
CKS1BP61024 AC245028.2-201ENST00000458673 253 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 AP003385.3-201ENST00000472498 287 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.94□□□□□ -1.78
CKS1BP61024 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC3.94□□□□□ -1.78
CKS1BP61024 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC3.94□□□□□ -1.78
CKS1BP61024 AC095052.1-201ENST00000509955 863 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 RNA5SP206-201ENST00000516703 121 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.94□□□□□ -1.78
CKS1BP61024 AC131935.1-201ENST00000524621 333 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC3.94□□□□□ -1.78
CKS1BP61024 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC3.94□□□□□ -1.78
CKS1BP61024 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC3.94□□□□□ -1.78
CKS1BP61024 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC3.94□□□□□ -1.78
CKS1BP61024 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC3.94□□□□□ -1.78
CKS1BP61024 DUX4L52-201ENST00000549363 777 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC3.94□□□□□ -1.78
CKS1BP61024 SULT1C2P2-201ENST00000562517 294 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 MIR378H-201ENST00000579966 83 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 RN7SL32P-201ENST00000580514 281 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC3.94□□□□□ -1.78
CKS1BP61024 MIR212-201ENST00000586026 110 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC3.94□□□□□ -1.78
CKS1BP61024 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC3.94□□□□□ -1.78
CKS1BP61024 AL512430.4-201ENST00000603085 613 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 AL078624.2-201ENST00000605063 554 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC3.94□□□□□ -1.78
CKS1BP61024 AC092681.3-201ENST00000609463 678 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 AC244517.3-201ENST00000616254 1235 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 AC096861.1-201ENST00000616652 240 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 RFPL4AP6-201ENST00000616792 846 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 MIR6849-201ENST00000618543 69 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 AC026367.3-201ENST00000619032 590 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.94□□□□□ -1.78
CKS1BP61024 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC3.94□□□□□ -1.78
CKS1BP61024 AC073488.3-201ENST00000631611 778 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC3.94□□□□□ -1.78
CKS1BP61024 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CKS1BP61024 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 MTCO1P28-201ENST00000574177 1528 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 AL672167.1-204ENST00000641875 3017 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.94□□□□□ -1.78
CKS1BP61024 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 EIF3EP1-201ENST00000433978 1316 ntBASIC3.94□□□□□ -1.78
CKS1BP61024 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CKS1BP61024 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CKS1BP61024 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC3.93□□□□□ -1.78
CKS1BP61024 AC009962.1-201ENST00000567327 3813 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 AC007390.2-201ENST00000606229 3803 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
CKS1BP61024 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CKS1BP61024 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CKS1BP61024 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.93□□□□□ -1.78
CKS1BP61024 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC3.93□□□□□ -1.78
CKS1BP61024 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 AL157702.1-201ENST00000398764 426 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms