Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.05□□□□□ -1.76
FOXA3P55318 AC244107.2-201ENST00000611773 76 ntBASIC4.05□□□□□ -1.76
FOXA3P55318 MIR6809-201ENST00000612189 116 ntBASIC4.05□□□□□ -1.76
FOXA3P55318 AC015819.1-201ENST00000613588 663 ntBASIC4.05□□□□□ -1.76
FOXA3P55318 AC135068.5-201ENST00000624197 983 ntBASIC4.05□□□□□ -1.76
FOXA3P55318 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXA3P55318 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXA3P55318 AL022393.1-201ENST00000625142 1677 ntBASIC4.05□□□□□ -1.76
FOXA3P55318 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.05□□□□□ -1.76
FOXA3P55318 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FOXA3P55318 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXA3P55318 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FOXA3P55318 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
FOXA3P55318 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXA3P55318 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
FOXA3P55318 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXA3P55318 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.05□□□□□ -1.76
FOXA3P55318 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXA3P55318 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
FOXA3P55318 AC126323.6-202ENST00000568092 3511 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXA3P55318 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXA3P55318 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXA3P55318 AC063976.2-201ENST00000425667 3556 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXA3P55318 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXA3P55318 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXA3P55318 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
FOXA3P55318 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXA3P55318 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXA3P55318 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXA3P55318 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXA3P55318 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXA3P55318 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXA3P55318 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXA3P55318 AC090018.1-201ENST00000434369 367 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 AC245291.3-201ENST00000443400 292 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXA3P55318 PPIAP32-201ENST00000449940 472 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 DNAJB5P1-201ENST00000454004 806 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 RPL36AP55-201ENST00000454114 305 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 RN7SL393P-201ENST00000463588 296 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 RN7SL502P-201ENST00000481857 290 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 RN7SL267P-201ENST00000485107 261 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 RPL32P33-201ENST00000487023 394 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 AC022133.1-201ENST00000490961 571 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 AP002453.1-201ENST00000492327 668 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 RN7SL591P-201ENST00000496150 292 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXA3P55318 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXA3P55318 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXA3P55318 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXA3P55318 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXA3P55318 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXA3P55318 AC009879.1-201ENST00000520029 839 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXA3P55318 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.04□□□□□ -1.76
FOXA3P55318 HSPE1P2-201ENST00000554777 306 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXA3P55318 AL390726.5-202ENST00000564800 256 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 MRPL45P2-203ENST00000573318 473 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 AC004232.2-201ENST00000574245 821 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXA3P55318 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXA3P55318 AC063977.5-201ENST00000601044 974 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.04□□□□□ -1.76
FOXA3P55318 AL512430.4-201ENST00000603085 613 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 AC011891.2-201ENST00000604949 397 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXA3P55318 MIR6070-201ENST00000613967 103 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 AC109583.2-201ENST00000617367 129 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 FAM27E2-201ENST00000619668 403 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXA3P55318 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXA3P55318 AP001962.1-201ENST00000624114 559 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.04□□□□□ -1.76
FOXA3P55318 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXA3P55318 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.04□□□□□ -1.76
FOXA3P55318 AC011447.7-201ENST00000624228 1590 ntBASIC4.04□□□□□ -1.76
FOXA3P55318 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXA3P55318 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
FOXA3P55318 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXA3P55318 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXA3P55318 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FOXA3P55318 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FOXA3P55318 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXA3P55318 PDZK1P1-202ENST00000425209 1350 ntBASIC4.03□□□□□ -1.76
FOXA3P55318 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.03□□□□□ -1.76
FOXA3P55318 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
FOXA3P55318 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXA3P55318 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXA3P55318 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXA3P55318 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
FOXA3P55318 OR9G4-201ENST00000302957 984 ntBASIC4.03□□□□□ -1.76
FOXA3P55318 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.03□□□□□ -1.76
FOXA3P55318 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
FOXA3P55318 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
FOXA3P55318 RN7SKP97-201ENST00000410966 333 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms