Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC245517.2-201ENST00000442890 346 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH12P55289 BUD31P2-201ENST00000449374 300 ntBASIC5.4□□□□□ -1.54
CDH12P55289 HMGB1P7-201ENST00000450921 612 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH12P55289 AC004129.2-201ENST00000457229 287 ntBASIC5.4□□□□□ -1.54
CDH12P55289 RN7SL254P-201ENST00000460609 284 ntBASIC5.4□□□□□ -1.54
CDH12P55289 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH12P55289 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.4□□□□□ -1.54
CDH12P55289 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH12P55289 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH12P55289 SOX5P1-201ENST00000524155 1127 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.4□□□□□ -1.54
CDH12P55289 OR4A41P-201ENST00000533053 928 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH12P55289 AP000619.2-201ENST00000546014 969 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH12P55289 AC093014.1-201ENST00000548926 724 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH12P55289 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH12P55289 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH12P55289 AL121594.4-201ENST00000556211 1196 ntBASIC5.4□□□□□ -1.54
CDH12P55289 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
CDH12P55289 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH12P55289 GARSP1-201ENST00000570895 719 ntBASIC5.4□□□□□ -1.54
CDH12P55289 TXNP4-201ENST00000575018 310 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH12P55289 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH12P55289 AC034236.3-201ENST00000605999 461 ntBASIC5.4□□□□□ -1.54
CDH12P55289 AC015922.4-201ENST00000612568 690 ntBASIC5.4□□□□□ -1.54
CDH12P55289 uc_338.31-201ENST00000615595 186 ntBASIC5.4□□□□□ -1.54
CDH12P55289 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CDH12P55289 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH12P55289 AL445528.2-201ENST00000620582 470 ntBASIC5.4□□□□□ -1.54
CDH12P55289 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH12P55289 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.55
CDH12P55289 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.4□□□□□ -1.55
CDH12P55289 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDH12P55289 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH12P55289 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH12P55289 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH12P55289 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CDH12P55289 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH12P55289 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH12P55289 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CDH12P55289 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CDH12P55289 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CDH12P55289 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH12P55289 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CDH12P55289 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH12P55289 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH12P55289 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 RN7SKP185-201ENST00000362813 326 ntBASIC5.39□□□□□ -1.55
CDH12P55289 RNA5SP279-201ENST00000365513 117 ntBASIC5.39□□□□□ -1.55
CDH12P55289 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CDH12P55289 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CDH12P55289 RNU6-1000P-201ENST00000391066 106 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH12P55289 AL354766.1-201ENST00000423396 542 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AL139158.1-201ENST00000424719 340 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH12P55289 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH12P55289 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH12P55289 AC007563.3-201ENST00000433233 371 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AL445928.1-201ENST00000435545 222 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AL445466.1-201ENST00000448432 357 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AC104629.2-201ENST00000468627 598 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AC098818.1-201ENST00000478593 252 ntBASIC5.39□□□□□ -1.55
CDH12P55289 NPM1P17-201ENST00000479221 602 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AC044810.1-201ENST00000480271 711 ntBASIC5.39□□□□□ -1.55
CDH12P55289 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH12P55289 RN7SL612P-201ENST00000497704 295 ntBASIC5.39□□□□□ -1.55
CDH12P55289 HMGB1P3-201ENST00000502802 616 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH12P55289 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH12P55289 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH12P55289 MTCO3P27-201ENST00000514397 196 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AC034244.2-201ENST00000514668 858 ntBASIC5.39□□□□□ -1.55
CDH12P55289 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.39□□□□□ -1.55
CDH12P55289 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH12P55289 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH12P55289 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH12P55289 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH12P55289 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.39□□□□□ -1.55
CDH12P55289 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.39□□□□□ -1.55
CDH12P55289 ARGFXP2-201ENST00000579304 949 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.39□□□□□ -1.55
CDH12P55289 AC068768.2-201ENST00000602352 343 ntBASIC5.39□□□□□ -1.55
CDH12P55289 QTRT1P1-201ENST00000604344 1078 ntBASIC5.39□□□□□ -1.55
CDH12P55289 HIRAP1-201ENST00000605318 787 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AC112503.2-201ENST00000609005 552 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AL096803.3-201ENST00000609032 532 ntBASIC5.39□□□□□ -1.55
CDH12P55289 AL021918.2-201ENST00000613415 194 ntBASIC5.39□□□□□ -1.55
CDH12P55289 MIR8084-201ENST00000614105 89 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 231.3 ms